Riboviria isolate Culex/Masinga5M3/2023/Netjeret_virus:segment:RNA2 Capsid protein (capsid) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Riboviria",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Masinga5M3/2023/Netjeret_virus:segment:RNA2"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Masinga"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111853", version 1}, gi 0670650651118531
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1432,
            topology linear,
            strand ss,
            seq-data ncbi4na '442248822288212422421424122482224482222442212221
41211412184221F248218214222248222144828211124428841448444148822248212814411241
844222112144184848484482824821428828241424114418822821121822824114288228444821
141841222442884121222421888221442148812228122281828124822128481841182148482821
824242141828822421828214184211212422142114221218442282142411822114414144124288
882122841824414442182144824221842221824144822184128441822144412824414288441284
124284414448182218121181821124882244118288824882241122142411414812842142114812
148812224414484128824442224811214242141182121124848184118241841828222248824842
811411412141824114248482884121124122211824124414211812148824822212812214221128
8442122142244228211222212241411228288444281241142821212482122184421824F4114242
8412428481242111212411241842184422212442411244128F4248222422828488821122244882
888444241118424128284241821841482884482411141848814814842114412812222242841221
424414811418284884481241221824881244114184484182211241222848841412421214124482
4488412182212481222128241822842212288142221182142418481212481F2411412412411884
1441148822144112484281228212142142411821148822F2114418442F44221221821181481428
121121844124212218824888218228182484122284121414222824121824812428122448848248
844222124422418824821221814424284112828121442481241821144128148148228248184122
884422128442214118248221241824242418181112481828111422144811122182141122212142
2244881142284184881418128181411841421112222812111112821114'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "capsid"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1279,
                    strand plus,
                    id gi 0670650651118531,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Capsid protein"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1279,
                    strand plus,
                    id gi 0670650651118531,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25566", version 1}, gi 067065065076255661
          },
          descr {
            title "MAG: Capsid protein, partial [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 425,
            seq-data iupacaa "PFPSRRSDRPGPRPPRQDMPXSSAPSQVSNGLRWEFPSLGTMAQQDVC
GLVSFSSEGFLNILEASWVKMTRLDTRISRQLPYPIYVHCMNQCLIAQIFRISDATRQQATWPQRIQGEDAFHLIGGH
QVAMPIEVHDWIQGLGAWTDAGGYPYNINVPESFVPNQRRVLQQVQLPGGDFGPVTAQNHNVYESMISPFVLRRQIEA
CLDNDPIDGAIQFVPLPANLAPAGLNPTENLLGYEAHTSPWHREALTLYANTNDAWPTANGLASRLCFNPVLWAKCDS
AIMSLGRKMLVVQGLPPLTSGVRSVGTTIVTEDGDPTTLLRRTDGRLTSTYPLDPATLAQSAMYTXRRRRIEEVPGTC
YLTAANQVPQGWXATINSSYNMDAPFVSSYRDPDRALDIVRYRLSLAHGRFVTIGAELYRRTIKD"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Capsid protein"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 424,
                    id gi 067065065076255661,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame three,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076255661,
              location int {
                from 0,
                to 1279,
                strand plus,
                id gi 0670650651118531,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}