Riboviria isolate Culex/Masinga5M4/2023/Netjeret_virus:segment:RNA1 RNA dependent RNA polymerase (RdRp) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Riboviria",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Masinga5M4/2023/Netjeret_virus:segment:RNA1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Masinga"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111862", version 1}, gi 0670650651118621
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1624,
            topology linear,
            strand ss,
            seq-data ncbi4na '112481241211441221822481241488241184424212222822
221448841411411141228112228444122142118411422428441411144882822288822242182481
828122422224418214848112842484881248188241241414244181211424841414488441128128
241211481821824114884448812411441812428414142412112428244181814814148121481242
122411488841241844218128421441142118241218248424282841488214141242428141121422
2288141822844121482414111484182114412441124188224184822124821222448F8122281218
121421114148224211211124141142484441441421821121441418228441818421212821418814
114144121211148211218422141284842242181242424211248448284212211441811411211148
224828248284442281222428842821148488128841142211481248121122888128441242228112
224221411418144812182118242881244142441412481224144144118421484428441811441128
411182218422422421411281248884228441281214214888841821112248222842284488448214
118142888241418128841141484888282124212441148841141248141824418411411412241812
812112218282824841484414121118814421281288218212212422228124218441141244112414
481221411412144144148122482244182484288812411818818241882118248211218418248812
211281242118214418242212841214284422441888228412848828444141841214248818142412
221444818848411888441841218842211418248241848421488244118411448411812442411414
281884412141424284441411848121188228144281281211818421844188222248224111241141
141128428842242228288488422141212282182141241182418141148112142242124888828244
418142121482482484844142221881224148418112818242241124228488248441188124412124
844111141148212812441242211411428488821218221411142888844884488422242242844141
411122241122488422841822411411228411141142812228822211414811884828411428424888
4442181124244482'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1623,
                    strand plus,
                    id gi 0670650651118621,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1623,
                    strand plus,
                    id gi 0670650651118621,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25576", version 1}, gi 067065065076255761
          },
          descr {
            title "MAG: RNA dependent RNA polymerase, partial [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-ends
            }
          },
          inst {
            repr raw,
            mol aa,
            length 541,
            seq-data iupacaa "TYDKDHPYEFEWRTPPQVEKKDLTLGPAMKPLEKGSPFPASYLPPRIS
VTACYVFDESGYKRERLELLDKYHRSWVTKDTLRATTLGYSRVQYAPKFDDGILQEAIDIVRSEFRDALEQPLRSWTV
EKVIKDGTIPMSTSPGXPYIQQRVRNKREAWEEHQQEILDMHTQIRRGHKVNMPDCAAYARNVVCTKDKNKVRLVWAY
PLAQVLLEAKYVQPLLDALTRQKIGTSIAYGAETYRGGMQWLDKELKSMPPQNYVCLDYSSFDQTVPAWLVRIAFEIL
EECFSRTEVEDVDRMKKTDTTTISREWRQIRHYFITTPLRMEDGTRYQKTGGVPSGSCFTNIIDSIVNMIVTNYAIRI
ATDSWPDFLTVLGDDSVIATQGIVNLDDIAKIVDVQFGMKVNTAKSYWTERWENVQFLGYYNMHGFPVRNEEELLAAL
LLPDTSSDESIEVTAARFLGIAQSSCGAHYRVITIAERLFVELRTRGKEVTTDAKKLFHIQKAFGWLPAAGEKPEPLP
DPKNLKEATLPKSNCLKLRLGITRV"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 540,
                    id gi 067065065076255761,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076255761,
              location int {
                from 0,
                to 1623,
                strand plus,
                id gi 0670650651118621,
                fuzz-from lim lt,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}