Orthophasmavirus isolate Culex/Museum61/2023/Orthophasmavirus:segment:L RNA directed RNA polymerase L (RdRp) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Orthophasmavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum61/2023/Orthophasmavirus:segment:L"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111870", version 1}, gi 0670650651118701
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 6464,
            topology linear,
            strand ss,
            seq-data ncbi2na '3304CC5C0603A35E28281B742BBC9DFE9488BCD22292042D
2028284881D48211E3A108D0437AFBAE4882D4FEFBCD0A10F49CDFB40E081C2EC95294D1EECE00
EE3A09484C3B7ACE1F8CC58880FD707A2210EA920D07F5B97DE4087EF3EB233288E78E3083CD95
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2101093FB7CA1F88B00A2887E0F20AE300A0F1D3EFE0A5F7E38213428EF89EB57C445C20078238
0C3E138D0AF8AF8CA701A64D31FC210642082F82793F88BB9F802042ACA02D397542D84F82BCF8
432D3D4CB61007A0D89C3CD88EB5C8DD937A145E08E1B00A3171E8DC7152733D075208E034B588
C100E1048E2B020438E1F028A42ACCE8431431008B50AA80417BC1120FE12E839080A340810480
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58F43BEB08C1C1E83DE4A6021FE4B2E417D7BCDC2E429C4492E409E0BACA5E7C5CDE3DC8674D20
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463E20210180814A104E4441753EB93B7E03B10A0082FE38084392243093E64A2F4D03508218E8
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BA5D2A0E7C307ED441ED44B3BB8F3EAF90B97D0009F35C3308333B1BA7EBD1D238F4EAE1EFEEE0
410A38FD77EF747FD28EB240827BDEFE08C0E20827BAA2B21372B89FBB50F105C0EB2AE4FE12FD
02E4F243A0EDC1784C5107A5CC8EE04340CD2C3124ADC48D2AA80328B8E30EF8E1ED71841230E4
E5C43BEBAAE42009F7D349F54D89FAEAFD4239D2FF427E8BEBAB70E79318607E7810C484280710
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2103E3AE0D293C41484380C37A93B0D23EF80490F3138640CC8072280EE30160E520FE3182CE11
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4E0718BF8C3AFA9F4E507BAD3F63739420BAF1131C5C0B7234FFED041CD3441D4822AFB3D438CF
A3585B0835A0CDB2CBC081780BFE2D210E4F88B4ECED25F3AB8E3A025D30B364E80B3C84A17C9D
177C0052384FE2FAEC4F8EAF4F9E081FF4082830E8A1F8E78921734B91433710D20A38C94394C2
470C2DC85EDE83BC72B53F1042F93ADCA9C5247278E0823147B234ECBB387ABCF8232283AC8113
A2F530841E3B2225F8E49333E1CE1123BCF02848B08C08210090C38ABBCE4241FEA7DFC12D0C1F
BF8DC76808F3F14423078EC3930825C12E230C24F8E28E18FA31E4015D4D0785CF77F2CCE80813
A31E393FE8A12F110D0A7E0CE4DF74D4D57FE04E28C0F3C2E3C4403DB340DCF22BE08942173D82
40F623BD6F030B0F2AC27F013F3A9CAFCB3C8BBBF7F2332F3C8CC7EAED74939E'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 6357,
                    strand plus,
                    id gi 0670650651118701,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA directed RNA polymerase L"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 6357,
                    strand plus,
                    id gi 0670650651118701,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25593", version 1}, gi 067065065076255931
          },
          descr {
            title "MAG: RNA directed RNA polymerase L, partial
 [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 2118,
            seq-data iupacaa "YNIYLNEMDPEEGTSQGVSSLARELSERQNKSERKDRELQKTLMDKIN
NLVVVQRSPFVVIKDNSAILSNEELSVAQAITVYENVMEARHNVWYDLIYREKFPNWRDNGAESTFRAFCKDLLLVDI
GDADDKNYRPDILLFNKRINEVIIGDITVTSNISAATTRKHEKYTCLVAILEQHDLFKVTHLDFVLREDMSNLRQMIN
KFINTGILPNGLDYSLHRNYCTSATDLMIAVRSLCPDKQAFVLGLESKRRRLELEGDKRNYSLFEGLLDEDIKDVELV
PYTPKKTEDEIIDMIKVEVDRLNGASYFKTTQEEVEAAFESVLEKNKGRKVMPPKSTLKVIDNSHSIVDKTGIELIIE
MVLDLASGPPEDDVKGYLLDLLPSYIQLQKMKSVRDNKMTTDEVKNNDDLKEARVYGQYQYKRVQGGNNLLTQNLTVE
CKKGSKNNRNVKKEPAVIDLENMNHYESFIMNSIKYYGEVSNKPHFLDDSWDSYNKLEEENTIDEREQYRYVKSTTGA
QLCNSMSGLYNRIMHMSTRQGKYDNIYIPPNGSFLCIIPNDHAPVDRSTCDLPMIFVTRTPINESLNHIEAEHQYSTA
EYTYYVSKLCRFNVGKITNWNSAGERLCSSATFLLSKCKATQQCKAEVVGLLTYLILDAHQKVSEYLDLLKYISFMPF
ADLNRLPSLIADKCDLLMKTKMDAWMLNRIRSYIRELHDVSKLQAEKPTPVVCNGMVHTDSLGITMRLPSFFNVMIRH
NDPTEFIEEVSMLFTSRPKQLYGSQFLDMSITMTAQWQLDFEKEKEEYGGWANNGHGDGSFPFNARFCYSSDAIYYAT
QQFERHVEATSTKIENHLFSSTYSGFMHENCSLRGCTIEKDKRKNQDNMHTTSIGACLEMYKEKKFDERQCRAISIAQ
EFIKSKKTMEFSMSQKEQRGSGRPIATPSLGTKAVLMMVEKPEASIGTFVKNNILVAGRNKLKEQHLAYKETISVGLN
QGLTKVYQLTEDQTKYSENDNPHKYEVYLRTSTILKPDIRRLQLAGLRMLYNRRHLIHRLPEKIMTDNDLHRQAYTDA
NTRGVKTEIGWPQGMLNNLSTTVHSMCDYWVASAFKKAYPNIRIYVRGLVHSDDSWVTVCVNNKDDFLLFSLFRMVAK
KLFCLKINEKKLWGGRHLGELVSNYNLNGRVHLTVSKCISNGMSNLTYHNWPIDVNNQISVIQQVYRSGGKIGVMIML
MTVLRQQIMHAYNVGGVQEKLLHQLPIELGGFPRCSVFKLGVGGSNAAYDELAEQYRQGNYKEAYKLVCAAAAVTRIT
VNDGADTVKDENWADDDYAEVSLPSKGELLKGIKFLLPKSSKLKHSLQMIYEVTKNYPDDGLGMIITKPITLAESLGH
LRQNTSGTLYQLATEGFGQSKRRLAISQAQQASGKVVKIHNAGTMTMDELYNYLKTMNINEEDKLMVNQALQPDNEII
WACNQIVETAIIHDANIETRGNVINRMPEFDTKYDTISPIKDVLLHIIDSHYAKINKPTNYYDKYGTNYTCNETLKND
AANIMSRFPSYFSYYNVIRACSIIMQNKYNTIKERTWVQPRIESDTMTGFLESLYGVSLREGMVYKIYSQPIRSKQSE
SDSGIVKSLYTAEVMNNVYPGSFKVEKIGDKTAIDALQSVDPIKLNKNDSLKYGLLMMRMCKNTDYLRKMYADDKFVY
EWVTRQRYYNGRYIGNWCVRYQIGNQSGEVNHINGMTYIKSSTISLPPILSAMRLIASRCFNMNYEFDNGWASCQLWS
FRSMPRSGYTYYLKSRSFLSTTIITTPEEGCIPMILDPTVRIRNIVVVKEPESFESDNALRVMYVSLMGDDGKPHKYR
MESIRQDLSSPLKNQMTFELVYIDGFIAEELFKEGIMEDLMLSRPISAPISTIRRMIANAISTNKSRPVWNVTRSIYN
KLHGLGLPALADEEDTTVDHVVYDWVIEDRGMVEHMEFHKTTDVESLDAAYIDYDTDVIKGQSKIKKTKAIMRVLCKQ
LWASLTVNNLFDLLGKIIYHKITDVMHKKPNSEIISIDEDDDWILQNPPSTDLFSLVYGKNMDTDAFWRTVTQSRLEY
ASSHPSPFEHEDKLLSDYTKFVSNLLEVEEPRPIRSKFEMFR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA directed RNA polymerase L"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 2117,
                    id gi 067065065076255931,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076255931,
              location int {
                from 0,
                to 6357,
                strand plus,
                id gi 0670650651118701,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}