Orthophasmavirus isolate Culex/Museum61/2023/Orthophasmavirus:segment:S Nucleocapsid (Nucleocapsid), Putative glycoprotein (glycoprotein), and Uncharacterized protein (ORF3) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Orthophasmavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum61/2023/Orthophasmavirus:segment:S"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111872", version 1}, gi 0670650651118721
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 2248,
            topology linear,
            strand ss,
            seq-data ncbi4na '184812812488481111182411812441141121414122214441
411818288181121181828418128114121141122288481428414211122188848418848448182428
882221114221422114121411488448418188481421881121228411112884118188112418118181
122181142888488418818118128881114122114881188418881888212188122141188128411488
421212828881818882288884111418441411848211418881212444221844141828418828222841
141842841142211414114118288441448148841842821412841482142182142828884811412211
828448411441842148218221188848811428182841428142844841418814844842814128841848
422841828218842841148842111418228422114818228141841881882884441844121481211442
128141848218424214118218281211218844222841412214114848211411144211411842841218
211284414428214418812841111848412122841821148418211428441812818841288841411418
842182211844848228412841421412442842281211211414124221144241188442221411484421
128118211441244111211881848212842844118418248848882112488211482112814842122112
842121422211128142242844211248128428488412848211121442112118148844428881818828
841411188212211148142484841118441821841218228812122428882844842248188882114141
214288412811418418421141822848118288414842488844812411484211428148841842818211
211414842121411844844121488228841144182114412141218842842148884848228418844412
882111848411411121441441414411182118848821114412118411121488288842821411124141
144282111441448488F11142218428822288244112144144828822841141184412888841848228
882141218221441412182424124421182121142128214128842142142821142848818442812111
842844848248822841828221148222844122882444111281118284224884128442114824482412
184288488821448214228412884411412148418111421448482824128414884124421411411444
148884448428111414244414482188848412848228482428484484418228114182212114414212
111444182114144414442842812111848182142418484182144884441821418844114412882812
214114218422422114114482184482112884144148422882114114442118444421411228424412
114124488184181884812111848421881428812228118482214488144421818484118848111818
44421848848888412441448841414142821211841488F128212814118284428428144411814182
814812241448442821418821888181818888288848188218828888111811181848888481418488
148422821844221148881488881141142184284144412114888141888148111121181821281448
818481181414828818888288281448881488848181814811122812818181211128111228141141
1118114128281881'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "Nucleocapsid"
                  },
                  location int {
                    from 0,
                    to 359,
                    strand plus,
                    id gi 0670650651118721
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Nucleocapsid"
                  },
                  location int {
                    from 0,
                    to 359,
                    strand plus,
                    id gi 0670650651118721
                  },
                  xref {
                    {
                      data gene {
                        locus "Nucleocapsid"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "glycoprotein"
                  },
                  location int {
                    from 310,
                    to 1500,
                    strand plus,
                    id gi 0670650651118721
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Putative glycoprotein"
                  },
                  location int {
                    from 310,
                    to 1500,
                    strand plus,
                    id gi 0670650651118721
                  },
                  xref {
                    {
                      data gene {
                        locus "glycoprotein"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "ORF3"
                  },
                  location int {
                    from 1530,
                    to 1973,
                    strand plus,
                    id gi 0670650651118721
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "Uncharacterized protein"
                  },
                  location int {
                    from 1530,
                    to 1973,
                    strand plus,
                    id gi 0670650651118721
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF3"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25596", version 1}, gi 067065065076255961
          },
          descr {
            title "MAG: Nucleocapsid [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 119,
            seq-data iupacaa "MYYVVKIEYGRTETQGEYLITISDTKTRTLVAEQTICDCGIAFPKPAK
TEVGDIVALTPENLNINDNITISFVDYNTLKTKLIDLFHITRITEVAHSLYFLLKDGECQDLHGPWRSDSP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Nucleocapsid"
                    }
                  },
                  location int {
                    from 0,
                    to 118,
                    id gi 067065065076255961
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25597", version 1}, gi 067065065076255971
          },
          descr {
            title "MAG: Putative glycoprotein [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 396,
            seq-data iupacaa "MENVKIYTGHGDLILPEDAEAKRRILEVVDAQTESASALCKTNLVKDA
VIQFVKLSELAGEISGARLDVPDLIAEVAKILPSILDDYSWDGQYKALDVMRRIIYNIGPETRSVKKGKNADINWRLR
ITENVTPDQVIKLDTIDFEKIASNGVLTEQTAAYNKRRQGELAQKWQLIKDGNNYVTAGMIVVSTFKSTSAPTAQPKL
AAGNVLLLTVKQATIVGLYILEKFTKVACEMDHDILTPLSGAVFSRDSLTKMMQDPVILSAFGTKCKLVDAINKSAQN
GGQFLEGSRTDIAAVCVLIGTSNVKKQEERKSIVQRTMKQFFAQKREGSKEVXKAMLPFGTGGLPEEWTFDVLSDIQE
TSRRQSQALRLAAAQAVMATNAGVVPDLQVPGPSGN"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative glycoprotein"
                    }
                  },
                  location int {
                    from 0,
                    to 395,
                    id gi 067065065076255971
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25598", version 1}, gi 067065065076255981
          },
          descr {
            title "MAG: Uncharacterized protein [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 147,
            seq-data iupacaa "MLVSGQPDLEDSDKAGVSTELTAEEGSLGAKEREVICDCPVAVVDPKI
HKEHKGIKREGCYKCISDVIRLGSDWKDFYQKHAAKKVMVNLRSAFKKGNGAEPADKTVMILYKCALAYPNVQVRAYV
NCKYGHVVLTEVERAHNEXTH"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Uncharacterized protein"
                    }
                  },
                  location int {
                    from 0,
                    to 146,
                    id gi 067065065076255981
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255961,
              location int {
                from 0,
                to 359,
                strand plus,
                id gi 0670650651118721
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255971,
              location int {
                from 310,
                to 1500,
                strand plus,
                id gi 0670650651118721
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255981,
              location int {
                from 1530,
                to 1973,
                strand plus,
                id gi 0670650651118721
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}