Riboviria isolate Culex/Museum63/2023/Kwale_virus:segment:2 Capsid protein (capsid) and Movement protein (Movement) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Riboviria",
orgname {
mod {
{
subtype isolate,
subname "Culex/Museum63/2023/Kwale_virus:segment:2"
},
{
subtype nat-host,
subname "Culex; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Museum"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111893", version 1}, gi 0670650651118931
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1556,
topology linear,
strand ss,
seq-data ncbi4na '418881812882288448814222881818112841428811884288
818888112121184148111214884114111214288421828881128428211481428424184114488422
11122421122811242882842211411124424211814424211811411124144144142242F442224148
441488828428418441248188182482211141428411282281882414188111482442114418114822
822124828818818411422884214224122824122241184124844284114128284148448148882828
214181188844218822424141281414818242222428484444424184111418442828281482482441
482412844412221184124122484228148114142114482211148848128228112888214482221481
844214114114414884128282221424828244881214148241114818818428282824418824444418
181228184181412111422228848414488884428812881424848822822118114411414414214812
8884444121828441822128181144811222842144442281118144414124141242222222212F1228
228441228148484888418812212184F88144414481122281818411484241442182181141121114
818414218211218214214122821444818818114222888414182414184424118144418184181124
81842142142442241448288148211244112241888412218841441F118812142488828212418418
824111484418112484148411181211848488824144222224124844118888411228481441881481
21828144888482888411114822181288822411418112418488841888812848F218882484824118
14411818888848822811442828811141148111848842818882441111242F114182111181188448
228481184118288882118148211428228244142418118844882184181111888848214884181414
18288141222812142448418121F48211218848218211821F122818181418818144844418448418
18448488441818812422418F188124888818118822484121828884884212882444414444414448
41414882242442411814814241482428F41114841241441F822221822824148888821148442414
88821148848441221281881488'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "capsid"
},
location int {
from 60,
to 722,
strand plus,
id gi 0670650651118931
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Capsid protein"
},
location int {
from 60,
to 722,
strand plus,
id gi 0670650651118931
},
xref {
{
data gene {
locus "capsid"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "Movement"
},
location int {
from 777,
to 1553,
strand plus,
id gi 0670650651118931
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "Movement protein"
},
location int {
from 777,
to 1553,
strand plus,
id gi 0670650651118931
},
xref {
{
data gene {
locus "Movement"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25643", version 1}, gi 067065065076256431
},
descr {
title "MAG: Capsid protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 220,
seq-data iupacaa "MSKQLKKQLASLTAQVAAMKVAKPQPNASAKKRRNRRNKKRGGAAGPS
GVSADGRIIVQRAELLFEIKVGKDKSSTSYYEALQPTSTRMTWLKTLSGSFSQIIWHSARLEYRPAVGAMKDGSLVVG
VDWDPMTTVPSKSKVQSCTPNFQVPVWQKKELTLPASRLQSRKYYALSDSGDIPMIDKAPCEVLAYLACSSNKEEEQY
FGDIWIHYKVTLQGPK"
},
annot {
{
data ftable {
{
data prot {
name {
"Capsid protein"
}
},
location int {
from 0,
to 219,
id gi 067065065076256431
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25644", version 1}, gi 067065065076256441
},
descr {
title "MAG: Movement protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 258,
seq-data iupacaa "MXREVTLYEVRGIIRTKYEHQHQQTSGYYKPFEIEMANRDMITYAAAA
EVLVNGTDLTIEXNYSVSHDDSKVDNVSEIQCVSRPPTWNFEPVGLVHLGLSLKSPYFPKITMFDFTVHFVSNRNIFV
PKALKEVNVAISENAKIKIIGPVMNLFNSQAPRSDNWFMIKFCQLIEILDPTAVIXVNIVINXTYIDYRWDGDMVLDI
TPXITFYNSVTSLLHFGEGEGESSAANSSESLESDEXSPSSSFSSGEFQVVDHY"
},
annot {
{
data ftable {
{
data prot {
name {
"Movement protein"
}
},
location int {
from 0,
to 257,
id gi 067065065076256441
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256431,
location int {
from 60,
to 722,
strand plus,
id gi 0670650651118931
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256441,
location int {
from 777,
to 1553,
strand plus,
id gi 0670650651118931
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}