Orthophasmavirus isolate Culex/Museum64/2023/Orthophasmavirus:segment:S Nucleocapsid (Nucleocapsid), Putative glycoprotein (glycoprotein), and Uncharacterized protein (ORF3) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Orthophasmavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum64/2023/Orthophasmavirus:segment:S"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111901", version 1}, gi 0670650651119011
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 2249,
            topology linear,
            strand ss,
            seq-data ncbi4na '418481281248848111118241181244114112141412221444
141181828818112118182841812811412114112228848142841421112218884841884844818242
888222111422142211412141148844841818848142188112122841111288411818811241811818
112218114288848841881811812888111412211488118841888188821218812214118812841148
842121282888181888228888411141844141184821141888121244422184414182841882822284
114184284114221141411411828844144814884184282141284148214218214282888481141221
182844841144184214821822118884881142818284142814284484141881484484281412884184
842284182821884284114884211141822842211481822814184188188288444184412148121144
212814184821842421411821828121121884422284141221411484821141114421141184284121
821128441442821441881284111184841212284182114841821142844181281884128884141141
884218221184484822841284142141244284228121121141412422114424118844222141148442
112811821144124411121188184821284284411841824884888211248821148211281484212211
284212142221112814224284421124812842848841284821112144211211814884442888181882
884141118821221114814248484111844182184121822881212242888284484224818888211414
121428841281141841842114182284811828841484248884481241148421142814884184281821
121141484212141184484412148822884114418211441214121884284214888484822841884441
288211184841141112144144141441118211884882111441211841112148828884282141112414
1144282111441448488F1114221842882228824411214414482882284114118441288884184822
888214121822144141218242412442118212114212821412884214214282114284881844281211
184284484824882284182822114822284412288244411128111828422488412844211482448241
218428848882144821422841288441141214841811142144848282412841488412442141141144
414888444842811141424441448218884841284822848242848448441822811418221211441421
211144418211414441444284281211184818214241848418214488444182141884411441288281
221411421842242211411448218448211288414414842288211411444211844442141122842441
211412448818418188481211184842188142881222811848221448814442181848411884811181
844421848848888412441448841414142821211841488F12821281411828442842814441181418
281481224144844282141882188818181888828884818821882888811181118184888848141848
814842282184422114888148888114114218428414441211488814188814811112118182128144
881848118141482881888828828144888148884818181481FFFFF1281118121112811122814114
111181141282818810'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "Nucleocapsid"
                  },
                  location int {
                    from 1,
                    to 360,
                    strand plus,
                    id gi 0670650651119011
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Nucleocapsid"
                  },
                  location int {
                    from 1,
                    to 360,
                    strand plus,
                    id gi 0670650651119011
                  },
                  xref {
                    {
                      data gene {
                        locus "Nucleocapsid"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "glycoprotein"
                  },
                  location int {
                    from 311,
                    to 1501,
                    strand plus,
                    id gi 0670650651119011
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Putative glycoprotein"
                  },
                  location int {
                    from 311,
                    to 1501,
                    strand plus,
                    id gi 0670650651119011
                  },
                  xref {
                    {
                      data gene {
                        locus "glycoprotein"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "ORF3"
                  },
                  location int {
                    from 1531,
                    to 1974,
                    strand plus,
                    id gi 0670650651119011
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "Uncharacterized protein"
                  },
                  location int {
                    from 1531,
                    to 1974,
                    strand plus,
                    id gi 0670650651119011
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF3"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25661", version 1}, gi 067065065076256611
          },
          descr {
            title "MAG: Nucleocapsid [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 119,
            seq-data iupacaa "MYYVVKIEYGRTETQGEYLITISDTKTRTLVAEQTICDCGIAFPKPAK
TEVGDIVALTPENLNINDNITISFVDYNTLKTKLIDLFHITRITEVAHSLYFLLKDGECQDLHGPWRSDSP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Nucleocapsid"
                    }
                  },
                  location int {
                    from 0,
                    to 118,
                    id gi 067065065076256611
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25662", version 1}, gi 067065065076256621
          },
          descr {
            title "MAG: Putative glycoprotein [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 396,
            seq-data iupacaa "MENVKIYTGHGDLILPEDAEAKRRILEVVDAQTESASALCKTNLVKDA
VIQFVKLSELAGEISGARLDVPDLIAEVAKILPSILDDYSWDGQYKALDVMRRIIYNIGPETRSVKKGKNADINWRLR
ITENVTPDQVIKLDTIDFEKIASNGVLTEQTAAYNKRRQGELAQKWQLIKDGNNYVTAGMIVVSTFKSTSAPTAQPKL
AAGNVLLLTVKQATIVGLYILEKFTKVACEMDHDILTPLSGAVFSRDSLTKMMQDPVILSAFGTKCKLVDAINKSAQN
GGQFLEGSRTDIAAVCVLIGTSNVKKQEERKSIVQRTMKQFFAQKREGSKEVXKAMLPFGTGGLPEEWTFDVLSDIQE
TSRRQSQALRLAAAQAVMATNAGVVPDLQVPGPSGN"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative glycoprotein"
                    }
                  },
                  location int {
                    from 0,
                    to 395,
                    id gi 067065065076256621
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25663", version 1}, gi 067065065076256631
          },
          descr {
            title "MAG: Uncharacterized protein [Orthophasmavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 147,
            seq-data iupacaa "MLVSGQPDLEDSDKAGVSTELTAEEGSLGAKEREVICDCPVAVVDPKI
HKEHKGIKREGCYKCISDVIRLGSDWKDFYQKHAAKKVMVNLRSAFKKGNGAEPADKTVMILYKCALAYPNVQVRAYV
NCKYGHVVLTEVERAHNEXTH"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Uncharacterized protein"
                    }
                  },
                  location int {
                    from 0,
                    to 146,
                    id gi 067065065076256631
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076256611,
              location int {
                from 1,
                to 360,
                strand plus,
                id gi 0670650651119011
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076256621,
              location int {
                from 311,
                to 1501,
                strand plus,
                id gi 0670650651119011
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076256631,
              location int {
                from 1531,
                to 1974,
                strand plus,
                id gi 0670650651119011
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}