Partitiviridae isolate Aedes/MsambweniAMF1/2019/partiti-like_virus-2:segment:2 hypothetical protein no blastphit (ORF1) and ORF (ORF12) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Partitiviridae",
orgname {
mod {
{
subtype isolate,
subname "Aedes/MsambweniAMF1/2019/partiti-like_virus-2:segme
nt:2"
},
{
subtype nat-host,
subname "Aedes; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Msambweni"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2019"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111907", version 1}, gi 0670650651119071
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1409,
topology linear,
strand ss,
seq-data ncbi4na '144882111448218842288284814441121481118822218124
848141111481812221828812812128148284241881821118824448111821112818882428114141
8888111F2884188281411821188228441414442228112444811181288114828811288282841888
148884224121282444481482214422884111281122188821142248884111248142441428128882
1144821882441182F1884118481218211884812212224241112128421242811421188118884241
11288284121882121884182148228248888448841881881824222824818848811F814482818148
821828281821421848224411122421418882442221141118222128228224224881212442114112
841424411841141841114842284141182212284114841228122112218441122144281281884884
1211888811211811148848184812448221214228112814421418884441821188441222811F2182
184448881112218484124144121181241141484118822481812841821111882141221822484248
444218814244441141841814282888284884114188822884882281121144181144224224844182
14F8484844418148241212444811F4281182181F822142828844881814188122218142221F2111
184284812122424188211144184148884488812112182888882111882118424184482214281818
428121814421818818442418884124412248211112812241218881181418424824142111844841
414121881418881281481281121211181411144812128218814184112412841141114841184112
1488141841828118841211121122882818118814841128F8221184141822211884414224214284
811228884214281144181FF18148141828188882841128811442228214112112828282F2284288
281488884128884824224188224118112881818181F82481428211411122181822211288248111
488821141484188181818841221842121120'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1"
},
location int {
from 304,
to 543,
strand plus,
id gi 0670650651119071
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "hypothetical protein no blastphit"
},
location int {
from 304,
to 543,
strand plus,
id gi 0670650651119071
},
xref {
{
data gene {
locus "ORF1"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "ORF12"
},
location int {
from 452,
to 1327,
strand plus,
id gi 0670650651119071
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "ORF"
},
location int {
from 452,
to 1327,
strand plus,
id gi 0670650651119071
},
xref {
{
data gene {
locus "ORF12"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25670", version 1}, gi 067065065076256701
},
descr {
title "MAG: hypothetical protein no blastphit [Partitiviridae]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 79,
seq-data iupacaa "MYINCTTRETLHAKQLICETSDIHIDQSSFWLIIIALVLLXRSIVHLY
QHVRKPQISAQEIPLLRRYTARTERNEDESA"
},
annot {
{
data ftable {
{
data prot {
name {
"hypothetical protein no blastphit"
}
},
location int {
from 0,
to 78,
id gi 067065065076256701
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25671", version 1}, gi 067065065076256711
},
descr {
title "MAG: ORF [Partitiviridae]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 291,
seq-data iupacaa "MSGNRRFRPKKSHSSAVTRQELSGMKMKVPENPPEVTYQPWNQATIVD
NFNNKVVCTVHSLTRQIWDQLDPXHHGFKPCDEDNTKSEFRILIKIQTIRAWALAGKMIALSVEDFLVPNKDKAAVDQ
XCGIVDTGXANHXPALGYRLPIAXQNAVHRDSKDEFGLQHLFQIQCDGPAICYIGILWRFDGPSKLPTFNRCVEQMVR
DIRFTSTNTNRKVHSLDERLKKVNEQLDDLIDKQPSIISELSNEIPIGAAAVTFAAKDXIVDLFSELKALRTTLSPAS
SFDFVADSE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF"
}
},
location int {
from 0,
to 290,
id gi 067065065076256711
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256701,
location int {
from 304,
to 543,
strand plus,
id gi 0670650651119071
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256711,
location int {
from 452,
to 1327,
strand plus,
id gi 0670650651119071
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}