Partitiviridae isolate Aedes/MsambweniAMF2/2019/partiti-like_virus-3:segment:2 hypothetical protein no blastphit (ORF1) and ORF (ORF12) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Partitiviridae",
orgname {
mod {
{
subtype isolate,
subname "Aedes/MsambweniAMF2/2019/partiti-like_virus-3:segme
nt:2"
},
{
subtype nat-host,
subname "Aedes; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Msambweni"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2019"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111911", version 1}, gi 0670650651119111
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1398,
topology linear,
strand ss,
seq-data ncbi4na '448218842288284814441121481118822218124848141111
4818122218288128121281482842418818211188244481118211128188824281141418888111F2
884188281411821188228441414442228112444811181288114828811288282841888148884224
121282444481482214422884111281122188821142248884111248142441428128882114482188
2441182F1884118481218211884812212224241112128421242811421188118884241112882841
218821218841821482282488F84488418818818242228248188488112814482818148821828281
821421848224411122421418882442221141118222128228224224881212442114112841424411
8411418411148422841411822122F4114841228122112218441122144281281884884121188881
1211811148848184812448221214228112814421418884441821188441222811F2182184448881
112218484124144121181241141484118822481812841821111882141221822484248444218814
244441141841814282888284884114188822884882281121144181144224224844182148848484
441814824121244481124281182181282214282884488181418812221814222182111184284812
122424188211144184148884488812112182888882111882118424184482214281818428121814
421818818442418884124412248211112812241218881181418424824142111844841414121881
418881281481281121211181411144812128218814184112412841141114841184112148814184
182811884121112112288281811881484112828221184141822211884414224214284811228884
2142811441812F18148141828188882841128811442228214112112828282F2284288281488884
128884824224188224118112881818181F82481428211411122181822211288248111488821141
4841F8181818841221842121'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1"
},
location int {
from 295,
to 534,
strand plus,
id gi 0670650651119111
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "hypothetical protein no blastphit"
},
location int {
from 295,
to 534,
strand plus,
id gi 0670650651119111
},
xref {
{
data gene {
locus "ORF1"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "ORF12"
},
location int {
from 443,
to 1318,
strand plus,
id gi 0670650651119111
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "ORF"
},
location int {
from 443,
to 1318,
strand plus,
id gi 0670650651119111
},
xref {
{
data gene {
locus "ORF12"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25676", version 1}, gi 067065065076256761
},
descr {
title "MAG: hypothetical protein no blastphit [Partitiviridae]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 79,
seq-data iupacaa "MYINCTTRETLHAKQLICETSDIHIDQSSXWLIIIALVLLTRSIVHLY
QHVRKPQISAQEIPLLRRYTARTERNEDESA"
},
annot {
{
data ftable {
{
data prot {
name {
"hypothetical protein no blastphit"
}
},
location int {
from 0,
to 78,
id gi 067065065076256761
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25677", version 1}, gi 067065065076256771
},
descr {
title "MAG: ORF [Partitiviridae]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 291,
seq-data iupacaa "MSGNRRFRPKKSHSSAVTRQELSGMKMKVPENPPEVTYQPWNQATIVD
NFNNKVVCTVHSLTRQIWDQLDPXHHGFKPCDEDNTKSEFRILIKIQTIRAWALAGKMIALSVEDFLVPNKDKAAVDQ
LCGIVDTGNANHTPALGYRLPIAHQNAVHRDSKDEFGLQHLFQIQCDGPAICYIGILWRFDGPSKLPTFNRCVEQMVR
DIRFTSTNTNRKVHSLDERLKKVNEQLDDLIDKQPSIISELSNEIPIGAAAVTFAAKDTIVDLFSELKALRTTLSPAS
SFDFVADSE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF"
}
},
location int {
from 0,
to 290,
id gi 067065065076256771
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256761,
location int {
from 295,
to 534,
strand plus,
id gi 0670650651119111
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256771,
location int {
from 443,
to 1318,
strand plus,
id gi 0670650651119111
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}