Partitiviridae isolate Aedes/MsambweniAMF4/2019/partiti-like_virus-2:segment:1 RNA dependent RNA polymerase (RdRp) gene, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Partitiviridae",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Aedes/MsambweniAMF4/2019/partiti-like_virus-2:segme
nt:1"
                },
                {
                  subtype nat-host,
                  subname "Aedes; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Msambweni"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2019"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111919", version 1}, gi 0670650651119191
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1657,
            topology linear,
            strand ss,
            seq-data ncbi4na '142242211224818881118414881241442811481818411112
228822282414441444181222148841228114111442244812241824418842241142288212114411
121288844841211148148141841848412144111488821214442412288112182142841418411241
241288F18411488841824824821248822118418111121141222848481288882218228221412128
224841141488148122841411411418118222288212212F44844142484442142422141188222111
441211114822844888122881824841128144181211412111144441148228841221811414811824
111241118218442212484481242148144142144811248121221F88122141212418418888281224
142121418284811112141842811211118224842148488844881222128112848888814841441448
424884448481822128218424881828411412484812111241888222818142481244228141118442
411844844118421481818211841118484811824882122222844182112281248418211241881824
218488841811412248822122284428218124141842188282818888142141284888241818444824
848241114282141844888118184441148841842441411414288428124288811124218418424281
288218111812822848814188411814844841414188218411121F44244818822282144882844884
412811218248244214218128111242418218812F14181842848881211212112844182228122288
242841218881218444241841282288248848F48841144122848811228241141888142112148148
841141111888244448418188411812141811414884448412212182F82848811248821288828244
481881211828841244848242488811122821141812818818842482288218181222841414111422
441241248821412812884842824844828444121488484482182488444114814114842821111484
488441188148221141818818441112121214218882482221484418841141281828221214181222
111824188214188888411412288144288111822848241488144428222441422814888418444448
848812218848141122282222118242428814421488211482414481214111888411181828481882
12428121124114112282812212148844118844144118118110'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  location int {
                    from 19,
                    to 1653,
                    strand plus,
                    id gi 0670650651119191
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  location int {
                    from 19,
                    to 1653,
                    strand plus,
                    id gi 0670650651119191
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25687", version 1}, gi 067065065076256871
          },
          descr {
            title "MAG: RNA dependent RNA polymerase [Partitiviridae]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 544,
            seq-data iupacaa "MSYEAKYMKTLPSREGYPVDLRKAGTDRIAEAFTRKHFGDKVVDDVTG
KFHRATLTSAEMNDDXMKFDRRHVPMIKQDPVYFSILQTLREELVPEKKIIPFTTGGAWAAPEFPKDKSPGLPYRELG
YKTKGEVLDHKSNRNEIMATWYAVGAGNVHXLPDTMIFYRAQICKTDANKIRAVFGYPLTVFSEEVRWVYPLMRYLKT
CTNDFPIAYGLEMANGGMQYINEMCNRSPPGSTYVINDYRMFDKTVPPWLIRDAFSILADCFDMGRVESSDGLIWEVD
AEKSLLRFKRMMRYFINTPVRLNSGERFMKXGGIPSGSGWTNIVGSILNAIITRYAVYNTTGSLPFADIYMGDDSFVV
VEGPVNLEDLATVVEENFGVILNTDKSWVTTSSVNVHFLGYYNLDGVAFKPQDTIIASFIYPERKPDDVQTTCARGLG
QLWSSLGSRSAQKWLELVQDIMETHSISSQWIEDYLHRYPNRFRFLKTLGLNPVELGLPEPSLMGVVTIVEPSPIALR
QFKSRYRNLKYLYSRYNEEPLPQLELEE"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  location int {
                    from 0,
                    to 543,
                    id gi 067065065076256871
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076256871,
              location int {
                from 19,
                to 1653,
                strand plus,
                id gi 0670650651119191
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}