Partitiviridae isolate Aedes/MsambweniAMF4/2019/partiti-like_virus-2:segment:2 hypothetical protein no blastphit (ORF1) and ORF (ORF12) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Partitiviridae",
orgname {
mod {
{
subtype isolate,
subname "Aedes/MsambweniAMF4/2019/partiti-like_virus-2:segme
nt:2"
},
{
subtype nat-host,
subname "Aedes; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Msambweni"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2019"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111921", version 1}, gi 0670650651119211
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1539,
topology linear,
strand ss,
seq-data ncbi4na '488211144821884228828481444112148111882221812484
814111148181222182881281212814828424188182111882444811182111281888242811414188
88111FFFFFFFFFF821884228828481444112148111882221812484814111148181222182881281
212814828424188182111882444811182111281888242811414188881114288418828141182118
822844141444222811244481118128811482881128828284188814888422412128244448148221
44228841112811221888211422488841112481424414281288821144821882441182F188411848
121821188481221222424111212842124281142118811888424111288284121882121884182148
2282488F8448841881881824222824818848811F81448281814882182828182142184822441112
242141888244222114111822212822822422488121244211411284142441184114184111484228
414118221228411484122812211221844112214428128188488412118888112118111488481848
12448221214228112814421418884441821188441222811F218218444888111221848412414412
118124114148411882248181284182111188214122182248424844421881424444114184181428
288828488411418882288488228112114418114422422484418214884848444181482412124448
112428118218128221428288448818141881222181422212211118428481212242418821114418
414888448881211218288888211188211842418448221428181842812181442181881844241888
412441224821111281224121888118141842482414211184484141412188141888128148128112
121118141114481212821881418411241284114111484118411214881418418281188412111211
22882818118814841128F8221184141822211884414224214284811228884214281144181FF181
48141828188882841128811442228214112112828282F228428828148888412888482422418822
411811288181818118248142821141112218182221128824811148882F14148418818181884122
1842121120'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1"
},
location int {
from 434,
to 673,
strand plus,
id gi 0670650651119211
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "hypothetical protein no blastphit"
},
location int {
from 434,
to 673,
strand plus,
id gi 0670650651119211
},
xref {
{
data gene {
locus "ORF1"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "ORF12"
},
location int {
from 582,
to 1457,
strand plus,
id gi 0670650651119211
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "ORF"
},
location int {
from 582,
to 1457,
strand plus,
id gi 0670650651119211
},
xref {
{
data gene {
locus "ORF12"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25689", version 1}, gi 067065065076256891
},
descr {
title "MAG: hypothetical protein no blastphit [Partitiviridae]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 79,
seq-data iupacaa "MYINCTTRETLHAKQLICETSDIHIDQSSXWLIIIALVLLXRSIVHLY
QHVRKPQISAQEIPLLRRYTARTERNEDESA"
},
annot {
{
data ftable {
{
data prot {
name {
"hypothetical protein no blastphit"
}
},
location int {
from 0,
to 78,
id gi 067065065076256891
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25690", version 1}, gi 067065065076256901
},
descr {
title "MAG: ORF [Partitiviridae]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 291,
seq-data iupacaa "MSGNRRFRPKKSHSSAVTRQELSGMKMKVPENPPEVTYQPWNQATIVD
NFNNKVVCTVHSLTRQIWDQLDPXHHGFKPCDEDNTKSEFRILIKIQTIRAWALAGKMIALSVEDFLVPNKDKAAVDQ
LCGIVDTGNANHTPALGYRLPIAHQNAVHRDSKDEFGLQHLFQIQCDGPAICYIGILWRFDGPSKLPTFNRCVEQMVR
DIRFTSTNTNRKVHSLDERLKKVNEQLDDLIDKQPSIISELSNEIPIGAAAVTFAAKDXIVDLFSELKALRTTLSPAS
SFDFVADSE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF"
}
},
location int {
from 0,
to 290,
id gi 067065065076256901
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256891,
location int {
from 434,
to 673,
strand plus,
id gi 0670650651119211
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076256901,
location int {
from 582,
to 1457,
strand plus,
id gi 0670650651119211
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}