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Quaranjavirus isolate Culex/JujaH1233/2023/Quaranjavirus:segment:1 PB2 polymerase (PB2) gene, partial cds.

Accession:
C_AA111925.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Quaranjavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/JujaH1233/2023/Quaranjavirus:segment:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Juja"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111925", version 1}, gi 0670650651119251
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 2379,
            topology linear,
            strand ss,
            seq-data ncbi4na '114111418112218441111221141821428441442114111411
114428288418418842211442118848821412182122844142424411118228824211148222118284
211228824221118114211441142211411228111441822111822828418414212118411882F48282
421411181822218282848841211414111142411118242844428222224841188228421841442141
212121F21482144224221428484211418441442118211184488818841111244422221122112841
144148442411182848244418F28488211181811141482821148442141181221214284411884442
242442111428481288844441421142228141414114484448221412114112422288448441118882
124142211411411218281848218842842228F88222241411218248211284414414218141811444
118128241821418842141228424282128112218441842811428822118118111221418224228228
282112F18428441222148212114118428422418228422441128888441142112281822218214121
842888842882122812821248418211448422214414121444111144441448241282141841218844
441112288244121148148842184428428221224411148412822141182118888442241418411441
848111148211844248844242814421418842118442484214144282441848884428411212288214
412288188841448422484222488421411441448214444284218488881822121421144211281282
814224218441114111242148844448411488281282181821844414141441148841142281281228
411411482281214288848114481844142128288428482448411142422411824842282424282141
448448844888228842224428842848288218411184444288882812414824141112482418114428
418441111441142288811241148218282211122284428888228214241824412821848848412814
421121488841241242442114428481228411848444222888441488812142141421142112114212
222811418448814882881288212244412112118211228242144144882411118821448844428822
114411181222214288222828844112241112414144481218418444488288821112822428424114
188111412228218121288281228448822442211281214412128418114182218221211211221488
841184441411241444848114142842112112144441414111441442218221842812142814442428
128418124218412842811222241481821441424124288218842118418881884288242114844212
841148448228442222112821488248481284288221184442218412848482218241288224128211
882444842448421118221241144428128411448411244841422848848828112222141441448824
218412821428448421888242822444284414118818841141422141412114148822218411422288
214281F28284882411224842824841444841848248811448882848481214224241488488828418
411441821221842282144442411442142412818121424421448228248221821814818442281211
222244412821822828228241114412811424422842841141841228444141444422882221124224
4144288412821211444418418441448414411414414181411888484412221841812880'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "PB2"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 2373,
                    strand plus,
                    id gi 0670650651119251,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "PB2 polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 2373,
                    strand plus,
                    id gi 0670650651119251,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "PB2"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25696", version 1}, gi 067065065076256961
          },
          descr {
            title "MAG: PB2 polymerase, partial [Quaranjavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 790,
            seq-data iupacaa "RKITMENQDQLEARKKRLLMIAKAIVQTSPGARKILRKVPICNLRQIS
KEAKNLKDPNPLMSTMNSVSQKYPISVDKRKAKIAGLPREFLHEADTXQSGRQLCKMEAIKWFIENGPQPTEGVAKSV
GXLFKYKESQVAEYHSWNWAAAKLYFGEQALERRWVQTRTPLVEISRAKKNIYVIAALFPENIVNWRSIDKGILDQIA
DLRSLTMDAKLPIINQIRLLSTMLDPVTRMLPILPELLEATYPIRHAFASPTHVIKVPRRQGKGEVDSDDIGETFGQV
VAWLLHRKVTPESILAEMKDVKVNGVGARQIAMACRGSDVWLNTFRTLFEVPCPLQKEVRGCMFYPQQGNYSSRMERN
AVGVKFYSYHGREEVEAYYLKKSYSFVRYGALLLSVKAPNRASRSEVVGFLARLAVFMKWGFSTSRETSIRLMEKEAF
NEVISKPWLFLSDRTHVVTRQQFDDAARLYLNVGPLEFTAEQATSTPKMVSSYFTGTTINLAGGSKIQVGLPRKYPSF
PLGTETRGYMMGFFQTPLRRLKTLIHFYLVPANYRTLIRSIHNNQFEWENEGVRAATTGERKEAIHATARALLIRMTA
NPEYQERRFIAMIYCFASGTEVVLAPTQFVYCFQWAMTVSIDFRLNSGAVQIHEGLLKVNGEPVVLTPEEVRMTQLVH
FAPGWRIIEEPETRVPMKPFSXLCSNRAREGDVVKVSVYSRELFLMKDHHASGAKAATIQRQVLVHHSMAYNPGTHPL
LERTKRPAEDDLGEGPSQRRRLDSQGDDGGEEEEIEFVDP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "PB2 polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 789,
                    id gi 067065065076256961,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076256961,
              location int {
                from 0,
                to 2373,
                strand plus,
                id gi 0670650651119251,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
序列分析