Sobemovirus isolate Aedes/KisumuKAF3/2020/Sobemovirus RNA dependent RNA polymerase (RdRp) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Sobemovirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Aedes/KisumuKAF3/2020/Sobemovirus"
                },
                {
                  subtype nat-host,
                  subname "Aedes; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Kisumu"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2020"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111932", version 1}, gi 0670650651119321
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 853,
            topology linear,
            strand ss,
            seq-data ncbi4na '481812848884288441814282414242112844188224814422
111282288488844884488441482214881444414428441441111822141121448824411188284244
824888422814122488244248444188441244822114428188844884121848448121848882821411
182812211811122282282418448441884181841841114821418821442812848881484144888448
882448884144184481221444821142114424882484481811841141484428428128811211888848
8111814248814221414228828421281248F4241128281448484482112281844214281112142228
1282118244141841812148821422442288122884428441441481848811421828F414188F844481
811284881114424281144882142188444814148884284448888428884184411141228428122224
2281F8442111112122848881122881112181212142482884414111242848841488182148188848
124821184142214841848124118882828421414844282424148844482222118188428842281148
844114212884181821841122142282418144288424484188824448828288821828118448244118
18144418414884421112818110'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 784,
                    strand plus,
                    id gi 0670650651119321,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 784,
                    strand plus,
                    id gi 0670650651119321,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25703", version 1}, gi 067065065076257031
          },
          descr {
            title "MAG: RNA dependent RNA polymerase, partial [Sobemovirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 260,
            seq-data iupacaa "ILFAWIARAQLDSVGQTPCLVGWSPVRGGWRKIQNRFGNSAVVCLDRS
AWDWTVQGYLVDMWYMFLRNLPINPPRWWIDMMKVRFRLLFSEVWFRFEDGTRVKQGVRGIMKSGCYLTILLNSVSQS
LLHYVANSRCGQPMAAKQPYSIGDDTVQPALPWLEEYVKHLEIXGITVKGAKVQHWVEFAGFCFDGKTCYPAXWQKHL
FNLKHTQRLGETLLSYQYLYVNEPVMYEFLCRVARELGPQYCLPKLEALDIMNQPR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 259,
                    id gi 067065065076257031,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame three,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076257031,
              location int {
                from 0,
                to 784,
                strand plus,
                id gi 0670650651119321,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}