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Iflavirus isolate Aedes/KisumuKAM4/2019/iflavirus-2 Polyprotein (Polyprotein) gene, partial cds.

Accession:
C_AA111934.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Iflavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Aedes/KisumuKAM4/2019/iflavirus-2"
                },
                {
                  subtype nat-host,
                  subname "Aedes; Host_sex: Male"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Kisumu"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2019"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111934", version 1}, gi 0670650651119341
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1418,
            topology linear,
            strand ss,
            seq-data ncbi4na '418414182288844141841842142888481828288214144888
822122148242488888288428411118221221481141288428248418821122184148412182411414
118221448228821888828242888481218112121428411122421444218441888828121448188888
128442424414218818888821411884424121128281411118128188824211111282428118184441
484188822824224418888148288822118182284128488281181211414821441218842884284148
221128844111121888281844828888428182488282118111282442881181448281118488188222
114181121828842288428124844888128422188828128828284118211222128181441482481414
881214441221818411414411118288221182411888188422188281182122441181421124288888
448481111411844111418412111118241121428114111888121418128888114148828881211881
448128128884148422888284111428128448111428888114148284888211128428818812844881
481121414118111418421148122181888428288128481128418828281488828118844184111411
481418882881128418241828242242411288181128828412221828188214281248484241481428
81FFFFFFFFFFFFFF41884218422214281188881448111418244241128828228281128888818888
118211188111144884818411414888428411118448888821212218188242111411228888488188
812482818448111121848188441114821211184211822412281848828111881282428821411118
188111488418448222184488818128481221121188821222888184828448881114114214228481
188428488418412184184148481288188228411828288241118844888128288488882411118422
128848422828888141222118184421428182411411111411111881488411118414188281812888
11882111221841418818811821841842818212241811'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "Polyprotein"
                  },
                  partial TRUE,
                  location int {
                    from 108,
                    to 1417,
                    strand plus,
                    id gi 0670650651119341,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Polyprotein"
                  },
                  partial TRUE,
                  location int {
                    from 108,
                    to 1417,
                    strand plus,
                    id gi 0670650651119341,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "Polyprotein"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25705", version 1}, gi 067065065076257051
          },
          descr {
            title "MAG: Polyprotein, partial [Iflavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-right
            }
          },
          inst {
            repr raw,
            mol aa,
            length 436,
            seq-data iupacaa "MSDIEENPGPSFSRFVHNTAETAGHGFSTGIFTGAEHYFSELATTLEN
TISQKLANMGVISSPDFSLSNILTVLIQESGHCLLSPTWKTFLWSFAIVLNKLGLIGLNVIPKITSCLATWFTAISTS
LNQPTIGVVELQGPYEEENLPIEFIAILITGIATLFGVKEWKDDKNRTAKKFTDTFKSSLQLGTTLSAFLKATGKAFK
SLFQTAYYWLVTENKDASTIFALTVTDSLVSNWMKEVDFLTDRSRRELITSDPSIQLRVRVAXXXXXXLHAQLILGKD
RRTSPLTFYFNQIKRLYEEFAENGFSHHIRKEPFVIYVYGKTCIGKSQMQSDLCSKLLASENIKVDGPMVYTVPTISP
FMSGLKKQPVIAVDDMMSVLIPESLRNWFTLVFENATCASFRPNMAAIEEKEKLVENEILYFNSNHEIINHDAITD"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Polyprotein"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 435,
                    id gi 067065065076257051,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076257051,
              location int {
                from 108,
                to 1417,
                strand plus,
                id gi 0670650651119341,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
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