Viruses isolate Culex/KisumuKIM3/2019/virus Putative RNA dependent RNA polymerase (RdRp), Capsid protein alpha (capsid), and hypothetical protein no blastphit (ORF4) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Viruses",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/KisumuKIM3/2019/virus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Male"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Kisumu"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2019"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111936", version 1}, gi 0670650651119361
          },
          descr {

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                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 4690,
            topology linear,
            strand ss,
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218441812882111222248818482114241814412812448241141418828141124482842144148111
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441241848828841448442441142114141148222211118422848881214212122811848424814841
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44244242118282124421888881844244411212144122144122848428222848122221814221FFFF
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414121142828218142828142121441214412818114112842122841111448481828142221441848
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8241841228241482214118841882211122244111188844112818141118242182F4812282221814
8844141481888818841111888881111288882211'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  location int {
                    from 49,
                    to 3321,
                    strand plus,
                    id gi 0670650651119361
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Putative RNA dependent RNA polymerase"
                  },
                  location int {
                    from 49,
                    to 3321,
                    strand plus,
                    id gi 0670650651119361
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "capsid"
                  },
                  location int {
                    from 3363,
                    to 4625,
                    strand plus,
                    id gi 0670650651119361
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Capsid protein alpha"
                  },
                  location int {
                    from 3363,
                    to 4625,
                    strand plus,
                    id gi 0670650651119361
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "ORF4"
                  },
                  location int {
                    from 4427,
                    to 4678,
                    strand plus,
                    id gi 0670650651119361
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 4427,
                    to 4678,
                    strand plus,
                    id gi 0670650651119361
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF4"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25709", version 1}, gi 067065065076257091
          },
          descr {
            title "MAG: Putative RNA dependent RNA polymerase [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 1090,
            seq-data iupacaa "MDTSNPVMSSDRTTVEEILERSAGVKRQDLSFLGEVARTAKREYLSCE
IVFPPLEVRQIVSEFKKSIPRVESERSGELDSEVFEVVMEKMPVCGLMDEQGIPLHPAGKNQTGGHVKVNRVFGKSAG
VPLGLADIVEVFGPEVLQRKMVYTSGTWQGFKARLKQQMSRKPVPLYKTMSEARGAAKMGLNPALDQLDQWMPRDPNP
NWPGVKTDIVDALMGGIKVTANSSAGAPYWRNKGECMEQILNVGLPIFVKAVKENKLDDLWRKNPEFFLCEVKNKTDR
YKVSELTSKTRPYVSVPAHIAFLVSMLSQGFQETLKVFTDDETSSNAYGFSSTNGGLSKMVAWMRGADKRGRVCCYGD
DARIAVLREGKVWVVDPDFKQMDGSIDGKDIELTIEWILRHLRKDQGVSDTPAFWDGIAKVWKRMATDPHFVVDGTQV
YRKRSRHGLMTGIPGTTLFDTVKSVGVWNTYLDLASVNGWNPLDEDRATDFMAKNGLVIKPGTWNPAVLPEDKDQQLL
TDHKFLGTQIRCVDWEGHMIHVPTIPESDALEMLVTQKDDPFTKVSDTTQKRTLYERMRGXYITFGFENDRVASAIHN
VVNKLPAEIILMQTQIANGERPEHITLQDFNYPDSSGFPTKEFCYSLYSGLKPERYGWMQIFPDLEGLLADLKSERRQ
LGRKLRLALAERSDKTRDVLYTTEGESPPWDDVLEVAEAREVPKMPVYSTPNVRSEIARVVTSSNTIPAKRLPTRSEV
VHNVLTALGGISTVGDLKRAAGVHTASLVEAAQSHGIFMAGTQDQDLCSLYPIAXXTPTLQESLIRDWQKSNDKIDGG
SSHRRQALIALAQDRTIRTAPEKVYLAQDVLVAIPDLLEPKDPDMIVAALNAPLTRLYGGMKWEAHPPQPKEINPIKV
TLYVGAKERLERVAEARSASIKLAKAYIARLIXELNGFTLEETRMTTTVKPTQSTKVLSWADEVEEVDALKGPYAAPP
VEPIVFEQAPNLEAWMIEYDLVPDRLFPIFWRYAVASEESTEVVFARLLSKKQEDEAKAQSGSGGPIQRDPPEDQRSR
RSRLSVNQRQRQNRALNRRRRGPPRTDP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative RNA dependent RNA polymerase"
                    }
                  },
                  location int {
                    from 0,
                    to 1089,
                    id gi 067065065076257091
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25710", version 1}, gi 067065065076257101
          },
          descr {
            title "MAG: Capsid protein alpha [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 420,
            seq-data iupacaa "MPSRKKNVNSCVCPHDGKQFSTRAALQQHKKMVHASPNETRPAPQPRR
RPRRRSGNGGALSSDLAPSRVPTVRNSAITTSGSDKVLVFTIKAQQSLIKSIPIHPGSIPRLSNLAKSFQRITWRSLA
VHVSPQVSTSINGGYVAGIVTAPVDEHITAADLSSTAGSQTKKWYQDAIIRMPLKTDKLYTSAGEEPRFSSPGTFWIC
SEGNPSSDLTVVVTFRWTVHLEGSTLEDDATSSFVLSGSLNSIGGKSIMGYKACGSTTVEEDVSGLIPAPIREVPGTH
FFRVPTYTVEYQEGVGDTGTIQMHFVAYKTDTKNFHFSEDGSSINASDWQADVDNQVLCSDGTYFKYTGQGNACKVAS
TAAPRSSPSHLKRHSREKLMTLSRKVASLESSLKKFEMLSQRDSMTSSPELIPNPENLEL"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Capsid protein alpha"
                    }
                  },
                  location int {
                    from 0,
                    to 419,
                    id gi 067065065076257101
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25711", version 1}, gi 067065065076257111
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 83,
            seq-data iupacaa "MQGGVDGSPPVVTFPSEAALTRKIDDLVEESGKSRVILEEIRDALAKR
LDDLESRIDSKPGKFGTIEIASVPPIVGEYFIENF"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 82,
                    id gi 067065065076257111
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257091,
              location int {
                from 49,
                to 3321,
                strand plus,
                id gi 0670650651119361
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257101,
              location int {
                from 3363,
                to 4625,
                strand plus,
                id gi 0670650651119361
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257111,
              location int {
                from 4427,
                to 4678,
                strand plus,
                id gi 0670650651119361
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}