Quaranjavirus isolate Culex/JujaKMH1232/2023/Quaranjavirus:segment:1 PB2 polymerase (PB2) gene, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Quaranjavirus",
orgname {
mod {
{
subtype isolate,
subname "Culex/JujaKMH1232/2023/Quaranjavirus:segment:1"
},
{
subtype nat-host,
subname "Culex; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Juja"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111941", version 1}, gi 0670650651119411
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 2393,
topology linear,
strand ss,
seq-data ncbi4na '221844111122114182142844144211411141111442828841
841884221144211884882141218212284414242441111822882421114822211828421122882422
111811421144114221141122811144182211182282841841421211841188214828242141118182
2218282848841211414111142411118242844428222224841188228421841442141212121F2148
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124124244211442848122841184844422288844148881214214142114211211421222241141844
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124144484811414284211211214444141411144144221822184281214281444242812841812421
841284281122224148182144142412428821884211841888188428824211484421284114844822
8442222112821488248481284288221184442218412848482F1824128822412821188244484244
842111822124114442812841144841124484142284884882811222214144144882421841282142
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488241122484282484144484184824881144888284848121422424148848882841841144182122
184228214444241144214241281812142442144822824822182181481844228121122224441282
182282822824111441281142442284284114184122844414144442288222112422441442884128
212114444184184414484144114144141814118884844122218418128881118448888241114188
114880'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "PB2"
},
location int {
from 2,
to 2362,
strand plus,
id gi 0670650651119411
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "PB2 polymerase"
},
location int {
from 2,
to 2362,
strand plus,
id gi 0670650651119411
},
xref {
{
data gene {
locus "PB2"
}
},
{
id local id 1
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25718", version 1}, gi 067065065076257181
},
descr {
title "MAG: PB2 polymerase [Quaranjavirus]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 786,
seq-data iupacaa "MENQDQLEARKKRLLMIAKAIVQTSPGARKILRKVPICNLRQISKEAK
NLKDPNPLMSTMNSVSQKYPISVDKRKAKIAGLPREFLHEADTXQSGRQLCKMEAIKWFIENGPQPTEGVAKSVGXLF
KYKESQVAEYHSWNWAAAKLYFGEQALERRWVQTRTPLVEISRAKKNIYVIAALFPENIVNWRSIDKGILDQIADLRS
LTMDAKLPIINQIRLLSTMLDPVTRMLPILPELLEATYPIRHAFASPTHVIKVPRRQGKGEVDSDDIGETFGQVVAWL
LHRKVTPESILAEMKDVKVNGVGARQIAMACRGSDVWLNTFRTLFEVPCPLQKEVRGCMFYPQQGNYSSRMERNAVGV
KFYSYHGREEVEAYYLKKSYSFVRYGALLLSVKAPNRASRSEVVGFLARLAVFMKWGFSTSRETSIRLMEKEAFNEVI
SKPWLFLSDRTHVVTRQQFDDAARLYLNVGPLEFTAEQATSTPKMVSSYFTGTTINLAGGSKIQVGLPRKYPSFPLGT
ETRGYMMGFLQTPLRRLKTLIHFYLVPANYRTLIRSIHNNQFEWENEGVRAATTGERKEAIHATARALLIRMTANPEY
QERRFIAMIYCFASGTEVVLAPTQFVYCFQWAMTVSIDFRLNSGAVQIHEGLLKVNGEPVVLTPEEVRMTQLVHFAPG
WRIIEEPETRVPMKPFSYLCSNRAREGDVVKVSVYSRELFLMKDHHASGAKAATIQRQVLVHHSMAYNPGTHPLLERT
KRPAEDDLGEGPSQRRRLDSQGDDGGEEEEIEFVDP"
},
annot {
{
data ftable {
{
data prot {
name {
"PB2 polymerase"
}
},
location int {
from 0,
to 785,
id gi 067065065076257181
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076257181,
location int {
from 2,
to 2362,
strand plus,
id gi 0670650651119411
},
xref {
{
id local id 2
},
{
id local id 3
}
}
}
}
}
}
}
}
}