Quaranjavirus isolate Culex/JujaKMH1234/2023/Quaranjavirus:segment:1 PB2 polymerase (PB2) gene, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Quaranjavirus",
orgname {
mod {
{
subtype isolate,
subname "Culex/JujaKMH1234/2023/Quaranjavirus:segment:1"
},
{
subtype nat-host,
subname "Culex; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Juja"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111946", version 1}, gi 0670650651119461
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 2369,
topology linear,
strand ss,
seq-data ncbi4na '418112218441111221141821428441442114111411114428
288418418842211442118848821412182122844142424411118228824211148222118284211228
824221118114211441142211411228111441822111822828418414212118411882148282421411
181822218282848841211414111142411118242844428222224841188228421841442141212121
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418448814882881288212244412112118211228242144144882411118821448844428822114411
181222214288822828844112241112414144481218418444488288821112822488424114188111
4122282181212882812FFFFFFFFFFFF11281214412128418114182218221211211221488841184
441411241444848114142842112112144441414111441442218221842812142814442428128418
124218412842811222241481821441424124288218842118418881884288242114844212841F48
448228442222112821488248481284288221184442218412848482218241288224128211882444
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228284882411224842824841444841848248811448882848481214224241488488828418411441
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412821822828228241114412811424422842841141841228444141444422882221124224414428
841282121144441841844144841441141441418141188848441222184180'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "PB2"
},
location int {
from 7,
to 2367,
strand plus,
id gi 0670650651119461
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "PB2 polymerase"
},
location int {
from 7,
to 2367,
strand plus,
id gi 0670650651119461
},
xref {
{
data gene {
locus "PB2"
}
},
{
id local id 1
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25723", version 1}, gi 067065065076257231
},
descr {
title "MAG: PB2 polymerase [Quaranjavirus]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 786,
seq-data iupacaa "MENQDQLEARKKRLLMIAKAIVQTSPGARKILRKVPICNLRQISKEAK
NLKDPNPLMSTMNSVSQKYPISVDKRKAKIAGLPREFLHEADTHQSGRQLCKMEAIKWFIENGPQPTEGVAKSVGILF
KYKESQVAEYHSWNWAAAKLYFGEQALERRWVQTRTPLVEISRAKKNIYVIAALFPENIVNWRSIDKGILDQIADLRS
LTMDAKLPIINQIRLLSTMLDPVTRMLPILPELLEATYPIRHAFASPTHVIKVPRRQGKGEVDSDDIGETFGQVVAWL
LHRKVTPESILAEMKDVKVNGVGARQIAMACRGSDVWLNTFRTLFEVPCPLQKEVRGCMFYPQQGNYSSRMERNAVGV
KFYSYHGREEVEAYYLKKSYSFVRYGALLLSVKAPNRASRSEVVGFLARLAVFMKWGFSTSRETSIRLMEKEAFNEVI
SKPWLFLSDRTHVVTRQQFDDAARLYLNVGPLEFTAEQATSTPKMVSSYFTGTTINLAGGSKIQVGLPRKYPSFPLGT
ETRGYMMGFFQTPLRRLKTLIHFYXXXXNYRTLIRSIHNNQFEWENEGVRAATTGERKEAIHATARALLIRMTANPEY
QERRFIAMIYCFASGTXVVLAPTQFVYCFQWAMTVSIDFRLNSGAVQIHEGLLKVNGEPVVLTPEEVRMTQLVHFAPG
WRIIEXPETRVPMKPFSYLCSNRAREGDVVKVSVYSRELFLMKDHHASGAKAATIQRQVLVHHSMAYNPGTHPLLERT
KRPAEDDLGEGPSQRRRLDSQGDDGGEEEEIEFVDP"
},
annot {
{
data ftable {
{
data prot {
name {
"PB2 polymerase"
}
},
location int {
from 0,
to 785,
id gi 067065065076257231
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076257231,
location int {
from 7,
to 2367,
strand plus,
id gi 0670650651119461
},
xref {
{
id local id 2
},
{
id local id 3
}
}
}
}
}
}
}
}
}