Quaranjavirus isolate Culex/JujaKMH561/2023/Quaranjavirus:segment:1 PB2 polymerase (PB2) gene, partial cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Quaranjavirus",
orgname {
mod {
{
subtype isolate,
subname "Culex/JujaKMH561/2023/Quaranjavirus:segment:1"
},
{
subtype nat-host,
subname "Culex; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Juja"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111950", version 1}, gi 0670650651119501
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 2388,
topology linear,
strand ss,
seq-data ncbi4na '122114182142844144211411141111442828841841884221
144211884882141218212284414242441111822882421114822211828421122882422111811421
144114221141122811144182211182282841841421211841188214828242141118182221828284
884121141411114241111824284442822222484118822842184144214121212122148214422422
142848421141844144211821118448881884111124442222112211284114414844241118284824
441882848821118181114148282114844214118122121428441188444224244211142848128884
444142114222814141411448444822141211411242228844844111888212414221141141121828
184821884284222818822224141121824821128441441421814181144411812824182141884214
122FFFFFF212811221844184281142882211811811122141822422822828211221842844122214
821211411842842241822842244112888844114211228182221821412184288884288212281282
124841821144842221441412144411114444144824128214184121884444111228824412114814
884218442842822122441114841282214118211888844224141841144184811114821184424884
424281442141884211844248421414428244184888442841121228821441228818884144842248
422248842141144144821444428421848888182212142114421128128281422421844111411124
214884444841148828128218182184441414144114884114228128122841141148228121428884
811448184414212828842848244841114242241182484228242428214144844884488822884222
442884284828821841118444428888281241482414111248241811442841844111144114228881
124114821828221112228442888822821424182441282184884841281442112148884124124244
211442848122841184844422288844148881214214142114211211421222281141844881488288
128821224441211211821122824214414488241111882144884442882211441118122221428822
282884411224111241414448121841844448828882111282242842411418811141222821812128
828122844882244221128121441212841811418221822121121122148884118444141124144484
811414284211211214444141411144144221822184281214281444242812841812421841284281
122224148182144142412428821884211841888188428824211484421284114844822844222211
282148824848128428822118444221841284848221824128822412821188244484244842111822
124114442812841144841124484142284884882811222214144144882421841282142844842188
824282244428441411881884114142214141211414882221841142228821428122828488241122
484282484144484184824881144888284848121422424148848882841841144182122184228214
444241144214241281812142442144822824822182181481844228121122224441282182282822
824111441281142442284284114184122844414144442288222112422441442884128212114444
184184414484144114144141814118884844122218418128881118448888241114188114888418
'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "PB2"
},
partial TRUE,
location int {
from 0,
to 2353,
strand plus,
id gi 0670650651119501,
fuzz-from lim lt
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "PB2 polymerase"
},
partial TRUE,
location int {
from 0,
to 2353,
strand plus,
id gi 0670650651119501,
fuzz-from lim lt
},
xref {
{
data gene {
locus "PB2"
}
},
{
id local id 1
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25728", version 1}, gi 067065065076257281
},
descr {
title "MAG: PB2 polymerase, partial [Quaranjavirus]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-left
}
},
inst {
repr raw,
mol aa,
length 783,
seq-data iupacaa "QDQLEARKKRLLMIAKAIVQTSPGARKILRKVPICNLRQISKEAKNLK
DPNPLMSTMNSVSQKYPISVDKRKAKIAGLPREFLHEADTHQSGRQLCKMEAIKWFIENGPQPTEGVAKSVGILFKYK
ESQVAEYHSWNWAAAKLYFGEQALERRWVQTRTPLVEISRAKKNIYVIAALFPENIVNWRSIDKGILDQIADXXXLTM
DAKLPIINQIRLLSTMLDPVTRMLPILPELLEATYPIRHAFASPTHVIKVPRRQGKGEVDSDDIGETFGQVVAWLLHR
KVTPESILAEMKDVKVNGVGARQIAMACRGSDVWLNTFRTLFEVPCPLQKEVRGCMFYPQQGNYSSRMERNAVGVKFY
SYHGREEVEAYYLKKSYSFVRYGALLLSVKAPNRASRSEVVGFLARLAVFMKWGFSTSRETSIRLMEKEAFNEVISKP
WLFLSDRTHVVTRQQFDDAARLYLNVGPLEFTAEQATSTPKMVSSYFTGTTINLAGGSKIQVGLPRKYPSFPLGTETR
GYMMGFFQTPLRRLKTLIHFYLVPANYRTLIRSIHNNQFEWENEGVRAATTGERKEAIHATARALLIRMTANPEYQER
RFIAMIYCFASGTEVVLAPTQFVYCFQWAMTVSIDFRLNSGAVQIHEGLLKVNGEPVVLTPEEVRMTQLVHFAPGWRI
IEEPETRVPMKPFSYLCSNRAREGDVVKVSVYSRELFLMKDHHASGAKAATIQRQVLVHHSMAYNPGTHPLLERTKRP
AEDDLGEGPSQRRRLDSQGDDGGEEEEIEFVDP"
},
annot {
{
data ftable {
{
data prot {
name {
"PB2 polymerase"
}
},
partial TRUE,
location int {
from 0,
to 782,
id gi 067065065076257281,
fuzz-from lim lt
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame three,
code {
id 1
}
},
partial TRUE,
product whole gi 067065065076257281,
location int {
from 0,
to 2353,
strand plus,
id gi 0670650651119501,
fuzz-from lim lt
},
xref {
{
id local id 2
},
{
id local id 3
}
}
}
}
}
}
}
}
}