Riboviria isolate Culex/JujaKMH562/2023/reo-like_virus RNA dependent RNA polymerase (RdRp) gene, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Riboviria",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/JujaKMH562/2023/reo-like_virus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Juja"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111955", version 1}, gi 0670650651119551
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 3684,
            topology linear,
            strand ss,
            seq-data ncbi4na '228481884841111244121884122288888411141841121248
241242882141121884141841214812128124212421211121418812122882184118122821282412
11482114211224282114418444414141818448128444418284F1482188124182212844848882F8
882411221212248128244884114422828211488884484884881841444811241822114212284211
248881241182242821118888241114181848182212811184141184118281128881111884181412
281121128188818481188884128448184218828811184184114114884188422214141112811118
214211842884112841811181188248282111212488881481181888441881184818814284812188
848188822181848184182824412184112884811122811842188441812841184418444184118842
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111888444184114414111114111212418811144111841114111144884182281818888444188828
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121481844111188881214111841282814212111241214211884841411112114884112481412141
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184141211818488228282144181881114481844121288214842112814214824281111182112118
884414221841141888811114481141284884188284412218884881181244811114118488811184
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881214841211111481111828884414112812241181114114414218882218284412118841181228
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114121842488828814488882111882218121218188828822812184414414481481882212224118
2188241F2418814124481218181211114118124111821218212211114414114818811411418882
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814181211118448841214841112114184811414184111211884182121481884881181428814281
441188814118282884111114484181412484111248211412424212184211848811211218814414
881114812282424218244818124418182141881184141411821111141248844881184884114118
214844114114881144214818228211822114884118848812842441118842121188181114881114
248182181424181112182121118888181844114481112214284888211881112411282284118188
824212811212481228282881281114281848442284488282282842181188818184821412114182
184882284124218214424218824211224218814212188212114442188881141188821418184181
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211821184241284111144812114281218441822114211884118188122812118121114128184888
122218888281241122221448481848828121884184112414224188281821842248811884184884
241218812284288244842184142484248814224841442111488184848128881218222184881284
142814144121114848882182841812182424488418841444'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  location int {
                    from 38,
                    to 3676,
                    strand plus,
                    id gi 0670650651119551
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  location int {
                    from 38,
                    to 3676,
                    strand plus,
                    id gi 0670650651119551
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25734", version 1}, gi 067065065076257341
          },
          descr {
            title "MAG: RNA dependent RNA polymerase [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 1212,
            seq-data iupacaa "MNTSTLQNIEMTVHYARTNRLHLHEYLTRQVKQPLKDGERYGTGDLXS
LRSTGVSFRTTPYSVEGLSSFGVVMRVTIQAPATFTNPLKFSKDMYPLNENESNFKIDRPNNYLCNFDWYAFLNDEEV
DCPEKLKSAMLELINNSSQTRFSNIWINVLAVHLYFHMYDLGHELVNLMHWILNGWDELPFHDVDDTFKDILPGTSTM
WPAMIYKYLSVCFDYICGNVTQIEALMSFQVALNQAEFRYQDTKLLTKNAYTIGIKVLLDDLPPAPTPIFTASGAFQS
EFIKDTSEIWDEGEKETRLKEMKEKVDPIFWDFFLKVKERIKTVEDVIRFDTIARCCRGDRMYEGTLIDLAVRDAVEP
AVHGPGVPAPKPTLYDKHDTSLVYDARYPSASFMSKVQEFYDLYIEILANHVDLRDPDNQFINYLSTSSAGYKLPMPD
EILKRIHNKKFQRLLAKVGGKRVVQAALNVNSANSMENFTEMTLAQTTAIVRKQVERRQRLIASINNTNLENGYPTYL
ANKAFSAVHDAAEHGKQTGNWQDLFKLLRVTTNNETICSSQDIKGMDTSVQLAVAKNQQFGAMKILKGKTVDSGPFVN
TVKECLNEHGDTVMVPLNGAQQRIAYAEKLGTKVTVTKSKIFGELPNKEGAFPSGQLNTSNHHTQFLILSFEAAILQW
TNEHKFAIGMSHLGVMGDDVAMALVCRIKTAQIFLSYLRERMLELGFVVEQDESMNMITFLQQQVINGRFNGFANRIT
PFTREDHKVRKSVPESCAEMQAVFDDLVARVYDPAAMLKFQRIFTFVTLSKHVMLVPTVKYDQLVKILSKYVRIYTYE
ANKDTNKQDMRFLGFQIPYTYFFLHGGGSIPPESFXRLDGTYTKEYEITSPKGEVLRRFLYDLSNSGDLDQEILAKYN
IHVAYFFIDTKWLTVKQDVRDETIDHSIVNSLARNLESLEKGDRRETSRRAHAMLTTLGVKVPRASVYGYQINERIKK
TLVNVEESVEEVKAVSSIQVELLLRKLHNYKVKAYHSDKHHKFYMEGKPAVSIKRTPEYFALTRTSLTKAMWPGSPLH
NLYVRQDHVPDASGAFATALAHSQGHFKNFRYDREAFQLSVRLASQHPIGSIVMNLFFEAINATEKVQATWIQAIEYY
LQYKDYVYPFSTNPRCMFYIDERADSIMPLIDVATLPASVHERALAVRQSYVYFTSHVTELEDKVFHLIHRG"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  location int {
                    from 0,
                    to 1211,
                    id gi 067065065076257341
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257341,
              location int {
                from 38,
                to 3676,
                strand plus,
                id gi 0670650651119551
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}