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Quaranjavirus isolate Culex/JujaKMH564/2023/Quaranjavirus:segment:1 PB2 polymerase (PB2) gene, partial cds.

Accession:
C_AA111965.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Quaranjavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/JujaKMH564/2023/Quaranjavirus:segment:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Juja"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111965", version 1}, gi 0670650651119651
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 2257,
            topology linear,
            strand ss,
            seq-data ncbi2na '808C14E80142349E8A420200A77E38F94290FBD21345E899
A00D7D902D50DE417D940C2428250817028D40D778E244383D2DD9203354DDEF842200980367A9
D55B83D7938A4844452D296527B908E8A4340EBF3E006A550507828BA6037B6A3DEF40CC08B742
E920C5127A0FA9669027B1FEA89095C8882BAB52108195FAE80FD18942081373B4F9E573D56204
DB41E8A24C8C2A0C76348F921799D1C14E8E709F50C30148D65D77414E7A152D10839E58D79681
FFA0905CD53484E7FE7D171D1B8D0AE54A212A00AA2B61D2384FAA017DA10B2F93A79D45A02E1D
48343FE9623828EC02D0E9BE99CA48F90E9B9229DA3BFA78117D285F3F8AE5B95BE4828AD2A9E4
EFF3512429071DC964E808064BEAB82F71D334EA22282F825C717820B5C49FEC2B3A2477E7B6B8
09960DB9766748AEBEBF5F95A7E7B7D380EA9FF718B6201B630A78E802825FC182D375015E9FF5
D2636874EFB872904BF8619A4292C5E0EEA57FA2FC492242410915708EBCBDF1F45A8410D05D92
8AF600F4AFA9F50A031549F577E8160188AB138EABDFD01D679823C08574C47DC5EBD6941C4A11
E308D4D441052FE0EA2062AEC22790412A8880A294D4E71272A671E3193879C1562CD289867D3E
438FCF9F642E91E0BAD7A55074BDBB1E7D43A94E1EED4D87D61D0F6AE6B9035182A71E0AE06B89
7BEF7055228AF64E1D27AE4FD9D6A7A20F3E089488422F54E095F49C5DEF605B9DB8AB8EDBC2BF
7BB12598BEFDE3828D14E5D2A9829261CC49A4AD76D4D32CE971055A874D775D8080'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "PB2"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 2256,
                    strand plus,
                    id gi 0670650651119651,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "PB2 polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 2256,
                    strand plus,
                    id gi 0670650651119651,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "PB2"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25747", version 1}, gi 067065065076257471
          },
          descr {
            title "MAG: PB2 polymerase, partial [Quaranjavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-ends
            }
          },
          inst {
            repr raw,
            mol aa,
            length 751,
            seq-data iupacaa "KITMENQDQLEARKKRLLMIAKAIVQTSPGARKILRKVPICNLRQISK
EAKNLKDPNPLMSTMNSVSQKYPISVDKRKAKIAGLPREFLHEADTHQSGRQLCKMEAIKWFIENGPQPTEGVAKSVG
ILFKYKESQVAEYHSWNWAAAKLYFGEQALERRWVQTRTPLVEISRAKKNIYVIAALFPENIVNWRSIDKGILDQIAD
LRSLTMDAKLPIINQIRLLSTMLDPVTRMLPILPELLEATYPIRHAFASPTHVIKVPRRQGKGEVDSDDIGETFGQVV
AWLLHRKVTPESILAEMKDVKVNGVGARQIAMACRGSDVWLNTFRTLFEVPCPLQKEVRGCMFYPQQGNYSSRMERNA
VGVKFYSYHGREEVEAYYLKKSYSFVRYGALLLSVKAPNRASRSEVVGFLARLAVFMKWGFSTSRETSIRLMEKEAFN
EVISKPWLFLSDRTHVVTRQQFDDAARQYLNVGPLEFTAEQATSTPKMVSSYFTGTTINLAGGSKIQVGLPRKYPSFP
LGTETRGYMMGFFQTPLRRLKTLIHFYLVPANYRTLIRSIHNNQFEWENEGVRAATTGERKEAIHATARALLIRMTAN
PEYQERRFIAMIYCFASGTEVVLAPTQFVYCFQWAMTVSIDFRLNSGAVQIHEGLLKVNGEPVVLTPEEVRMTQLVHF
APGWRIIEEPETRVPMKPFSYLCSNRAREGDVVKVSVYSRELFLMKDHHASGAKAATIQRQVLVHHSMAYNPGTHPLLE"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "PB2 polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 750,
                    id gi 067065065076257471,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame three,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076257471,
              location int {
                from 0,
                to 2256,
                strand plus,
                id gi 0670650651119651,
                fuzz-from lim lt,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
序列分析