Viruses isolate Culex/LuandaLCM2/2019/virus Putative RNA dependent RNA polymerase (RdRp), Capsid protein alpha (capsid), and hypothetical protein no blastphit (ORF4) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Viruses",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/LuandaLCM2/2019/virus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Male"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Luanda"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2019"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111973", version 1}, gi 0670650651119731
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 4703,
            topology linear,
            strand ss,
            seq-data ncbi2na '55702057FDFE1DF00320131D1994E8C7D0156F3B42632871
AD8223DC81ADE4A2C0884237B6F7EAA2BE42049C22A045DD7B80CB7D555760B0A48CB368BF0822
4D5DAB22D62289A227632E2BBF8AEB8E882397BFBA5E3A3890A0F5DD4D7928081484A294EF0AD0
4ABBDAC2DE6A2F55DA1F9A132F8AEFEB560B9C40800EBB11F4A05E90ABD02561C09248ED88086B
977730073B48A762896608EADD05495E850FA34BA3966A15C15C1E95AAE0848CFB6195C3A9A8C0
AE1A5075D25A665B1E88042A22E4E89235D0EEA7E54CFEE024BC080101E8637BA2820D78BDF5EE
E2B420401E163102E2E2745D40188573B77B579133E6F5FBF63BED50A3D4A217E02FF448E3887D
89065CE9F75D44068A9E2423AD97A399AE784022822DEF9C6A8E3959327B7E6E0A80B3AB2C8578
7F0123A3A76323A008CC89C14F8BA3DE211759023428B76884565F7A8E832502FE8020E9078574
FFBAF8E8152BB36406356D3A1D385A0C5E81067BF8C6B00DACA2EE81171FA3FA626C068E8157E8
628DA9058FF3A7083A5EB8D096A44E835E5B9D5608C085249E78585103F72815230AEEF8FA8A84
4E3D3B5718D522D239DF88E72C1120A3856F440AC2E110540220577380A38AA3ECCD17FABF8838
5ABA5D653510EFB4101F5E688D31E3901D03240688085E044D15F4A1F41C54875DE8FD41408BFE
71DDDCF6A5F0B5888C6BE8E48FF548FE8A973E921742DA220A43EA0809C21E99F9E26B484015A8
ED7B11458A888B515EA186F7E2BA6824220B5500E54FC491170EE6CB88C959B6F136D4114C5A70
8875515BDE2BED4439DD124FA8A0CD47BA88DD0089E7AEF4449777EC8A6990DD1A4FFCE9681128
5285EE757B154C94D545545F928B678C2A3E920890E308D8EAA76D5328842774C9DC9128481CC2
07917802BB17254A3B5FB253158DD7225408548CEF2D96574195574765FC68A0E0BA8A54555525
4288C055302B87773BE8D828887A02AF92298A2EC24C01F98297132429D3FF89F06AFC57A28066
0E1461EE01615024702E7C9EA58E0BA08AE824702A16C6595756F8173EEF604255417A09BA38D8
B187EB1585A7FD5CD77A2B392F9758A058682DBBF95975ED420928A3826024437A0BAE854F44A8
5756085228920AD5B749B83488499483624F81699208A155581E1570503DFF00774300C4134239
4D480800ED049ECCE55461A4243DD4562495F4924C200EB9398B5C38876549974156082976082B
7A03A289DFD758DE915D98B9512E681DA53C5176A77842B5EB7D14D0A7412DDD3C224D5CF454A8
53D461ED437650B6F5020D1FA6B7725B53B4B550B751F5341A29CEF9293EC1635238E044D1A5DA
37B6D0792AD1014203AC508E534D28E55C0868407F31B59A8822548F75D57A06F7A37BDE0AC154
9D23744BAEB85F4AE87B51722A7515C8A18E7136DFDB5ED6925D049368A40DCD3A8CC2979AB710
5BAC821B76A5C31795530882F52A1D1F7D6AE505C46BE2C52828BE88C7A04352391FEE97308584
5081F51FF48A3A0BD4F0E5241E909A1BA1052B9DEF58E91B3F42C45AD2A039390AE9B61A49556B
6D17D53782691D1A800F8E17ED9A02E90B762D35F8203D88E776408876385D8B520F8F5015A00F
E81CC80F937B1754CBE88B3FCF803FF007FD435FD4'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  location int {
                    from 55,
                    to 3327,
                    strand plus,
                    id gi 0670650651119731
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Putative RNA dependent RNA polymerase"
                  },
                  location int {
                    from 55,
                    to 3327,
                    strand plus,
                    id gi 0670650651119731
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "capsid"
                  },
                  location int {
                    from 3368,
                    to 4630,
                    strand plus,
                    id gi 0670650651119731
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Capsid protein alpha"
                  },
                  location int {
                    from 3368,
                    to 4630,
                    strand plus,
                    id gi 0670650651119731
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "ORF4"
                  },
                  location int {
                    from 4432,
                    to 4683,
                    strand plus,
                    id gi 0670650651119731
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 4432,
                    to 4683,
                    strand plus,
                    id gi 0670650651119731
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF4"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25760", version 1}, gi 067065065076257601
          },
          descr {
            title "MAG: Putative RNA dependent RNA polymerase [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 1090,
            seq-data iupacaa "MDTSNPVMSSDRTTVEEILERSAGVKRQDLSFLGEVARTAKREHLSCE
IVFPPLEVRQIVSEFKKSIPRVESERSGELDSEVFEVVMEKMPVCGLMDEQGIPLHPAGKNQTGGHVKVNRVFGKSAG
VPLGLADIVEVFGPEVLQRKMVYTSGTWQGFKARLKQQMSRKTVPLYKTMSEARGAAKMGLNPALDQLDQWMPRDPNP
NWPGVKTDIVDALMGGIKVTANSSAGAPYWRNKGECMEQILNVGLPIFVKAVKENKLDDLWRKNPEFFLCEVKNKTDR
YKVSELTSKTRPYVSVPAHIAFLVSMLSQGFQETLKVFTDDETSSNAYGFSSTNGGLSKMVAWMRGADKRGRVCCYGD
DARIAVLREGKVWVVDPDFKQMDGSIDGKDIELTIEWILRHLRKDQGVSETPAFWDGIAKVWKRMATDPHFVVDGTQV
YRKRSRHGLMTGIPGTTLFDTVKSVGVWNTYLDLASVNGWNPLDEDRATDFMAKNGLVIKPGTWNPAVLPEDKDQQLL
TDHKFLGTQIRCVDWEGHMIHVPTIPESDALEMLVTQKDDPFTKVSDTTQKRTLYERMRGLYITFGFENDRVASAIHN
VVNKLPAEIILMQTQIANGERPEHITLQDFNYPDSSGFPTKEFCYSLYSGLKSERYGWMQIFPDLEGLLADLKSERRQ
LGRKLRLALAERSDKTRDVLYTTEGESPPWDDVLEVAEAREVPKMPIYSTPNVRSEIARVVTSSNTIPAKRLPTRSEV
VHNALTALGGISTVGDLKRAAGVHTASLVEAAQSHGIFMAGTQDQDLCSLYPIAIPTPTLQESLIRDWQKSNDKIDGG
SSHRRQALIALAQDRTIRTAPEKVYLAQDVLVAIPDLLEPKDPDMLVAALNAPLTRLYGGMKWEAHPPQPKEINPIKV
TLYVGSKERLERVAEARSVSIKLAKAYIARLIFELNGFTLEETRMTTTVKPTQSTKVLSWADEVEEVEALKGPYAAPP
VEPIVFEQAPNLEAWMIEYDLVPDRLFPILWRYAVASEEPTEVVFARLLSKKQEDEAKAQSGSGGPIHRDPPEDQRSR
RSRLSVNQRQRQNRALNRRRRGPPRTDP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative RNA dependent RNA polymerase"
                    }
                  },
                  location int {
                    from 0,
                    to 1089,
                    id gi 067065065076257601
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25761", version 1}, gi 067065065076257611
          },
          descr {
            title "MAG: Capsid protein alpha [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 420,
            seq-data iupacaa "MPSRKKNVNSCICPHDGKQFSTRAALQQHKKMVHASPNETRPAPQPRR
RPRRRSGNGGALSSDLAPSRVPTVRNSAITTSGSDKVLVFTIKAQQSLIKSIPIHPGTIPRLSNLAKSFQRITWRSLA
VHVSPQVSTSINGGYVAGIVTDPDDEHITASDLSSTAGSQTKKWYQDAIIRMPLKTDKLYTSAGEEPRFSSPGTFWIC
SEGNPSSDLTVVVTFRWTVHLEGSTLEDDATSSFVLSGSLNSIGGKSIMGYKACGSTTVVEDVSGLIPAPIREVPGTH
FFRVPTYTVEYQEGVGDTGTIQMHFVAYKTDTKNFHFSEDGSSINASNWQADVDNQVLCSDGTYFKYTGQGNACKVAS
TAAPRSSPSHLKRHSREKLMTLSRKVASLESSLKKFEMLSQRDSMTSSPELIPNPENLEL"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Capsid protein alpha"
                    }
                  },
                  location int {
                    from 0,
                    to 419,
                    id gi 067065065076257611
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25762", version 1}, gi 067065065076257621
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 83,
            seq-data iupacaa "MQGGVDGSPPVVTFPSEAALTGKIDDLVAESGKSRVILEEIRDALAKR
LDDLESRIDSKPGKFGTIEIASVPPIVGEYFIENF"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 82,
                    id gi 067065065076257621
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257601,
              location int {
                from 55,
                to 3327,
                strand plus,
                id gi 0670650651119731
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257611,
              location int {
                from 3368,
                to 4630,
                strand plus,
                id gi 0670650651119731
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257621,
              location int {
                from 4432,
                to 4683,
                strand plus,
                id gi 0670650651119731
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}