Viruses isolate Culex/LuandaLCM4/2019/virus Putative RNA dependent RNA polymerase (RdRp) gene, partial cds; and Capsid protein alpha (capsid) and hypothetical protein no blastphit (ORF4) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Viruses",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/LuandaLCM4/2019/virus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Male"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Luanda"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2019"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111979", version 1}, gi 0670650651119791
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 4627,
            topology linear,
            strand ss,
            seq-data ncbi2na '5BCED098CA1C6B6088F7206B7928B022108DEDBDFAA8AF90
812708A811775EE032DF5555D82C29232CDA2FC20893576AC8B588A26889D8CB8AEFE2BAE3A208
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3BA9F9533FB8092F0200407A18DEE8A0835E2F7D7BB8AD081007858C40B8B89D175006215CEDDE
D5E44CF9BD7EFD8EFB5428F52885F80BFD1238E21F6241973A7DD75101A2A78908EB65E8E66B9E
1008A08B7BE71AA38E564C9EDF9B82A02CEACB215E1FC048E8E9D8C8E80233227053E2E8F78845
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419EFE31AC036B28BBA045C7E8FE989B01A3A055FA18A36A4163FCE9C20E97AE3425A913A0D796
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D102B0B84415008815DCE028E2A8FB3345FEAFE20E16AE97594D443BED0407D79A234C78E40740
C901A202178113457D287D071521D77A3F505022FF9C77773DA97C2D62231AFA3923FD523FA2A5
CFA485D0B6888290FA82027087A67E789AD210056A3B5EC45162A222D457A861BDF8AE9A090882
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628BB093007E60A5C4C90A74FFE27C1ABF15E8A0198385187B805854091C0B9F27A96382E822BA
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0B6EFE565D7B50824A28E0980910DE82EBA153D12A15D582148A2482B56DD26E0D22126520D893
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7D24930803AE4E62D70E21D95265D055820A5D820ADE80E8A277F5D637A457662E544B9A07694F
145DA9DE10AD7ADF453429D04B774F0893573D152A14F5187B50DD942DBD408347E9ADDC96D4ED
2D542DD47D4D068A73BE4A4FB058D48E38113469768DEDB41E4AB4405080EB142394D34A395702
1A101FCC6D66A2089523DD755E81BDE8DEF782B0552748DD12EBAE17D2BA1ED45C8A9D45722863
9C4DB7F6D7B5A4974124DA2903734EA330A5E6ADC416EB2086DDA970C5E554C220BD4A8747DF5A
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4AE77BD63A46CFD0B116B4A80E4E42BA6D8692555ADB45F54DE09A4746A003E385FB6680BA42DD
8B4D7E080F6239DD90221D8E1762D483E3D4056803FA073203E4DEC5D532FA22CFF3E00FFC01FF
50D4'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 3256,
                    strand plus,
                    id gi 0670650651119791,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Putative RNA dependent RNA polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 3256,
                    strand plus,
                    id gi 0670650651119791,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "capsid"
                  },
                  location int {
                    from 3297,
                    to 4559,
                    strand plus,
                    id gi 0670650651119791
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Capsid protein alpha"
                  },
                  location int {
                    from 3297,
                    to 4559,
                    strand plus,
                    id gi 0670650651119791
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "ORF4"
                  },
                  location int {
                    from 4361,
                    to 4612,
                    strand plus,
                    id gi 0670650651119791
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 4361,
                    to 4612,
                    strand plus,
                    id gi 0670650651119791
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF4"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25774", version 1}, gi 067065065076257741
          },
          descr {
            title "MAG: Putative RNA dependent RNA polymerase, partial
 [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 1084,
            seq-data iupacaa "VMSSDRTTVEEILERSAGVKRQDLSFLGEVARTAKREHLSCEIVFPPL
EVRQIVSEFKKSIPRVESERSGELDSEVFEVVMEKMPVCGLMDEQGIPLHPAGKNQTGGHVKVNRVFGKSAGVPLGLA
DIVEVFGPEVLQRKMVYTSGTWQGFKARLKQQMSRKTVPLYKTMSEARGAAKMGLNPALDQLDQWMPRDPNPNWPGVK
TDIVDALMGGIKVTANSSAGAPYWRNKGECMEQILNVGLPIFVKAVKENKLDDLWRKNPEFFLCEVKNKTDRYKVSEL
TSKTRPYVSVPAHIAFLVSMLSQGFQETLKVFTDDETSSNAYGFSSTNGGLSKMVAWMRGADKRGRVCCYGDDARIAV
LREGKVWVVDPDFKQMDGSIDGKDIELTIEWILRHLRKDQGVSETPAFWDGIAKVWKRMATDPHFVVDGTQVYRKRSR
HGLMTGIPGTTLFDTVKSVGVWNTYLDLASVNGWNPLDEDRATDFMAKNGLVIKPGTWNPAVLPEDKDQQLLTDHKFL
GTQIRCVDWEGHMIHVPTIPESDALEMLVTQKDDPFTKVSDTTQKRTLYERMRGLYITFGFENDRVASAIHNVVNKLP
AEIILMQTQIANGERPEHITLQDFNYPDSSGFPTKEFCYSLYSGLKSERYGWMQIFPDLEGLLADLKSERRQLGRKLR
LALAERSDKTRDVLYTTEGESPPWDDVLEVAEAREVPKMPIYSTPNVRSEIARVVTSSNTIPAKRLPTRSEVVHNALT
ALGGISTVGDLKRAAGVHTASLVEAAQSHGIFMAGTQDQDLCSLYPIATPTPTLQESLIRDWQKSNDKIDGGSSHRRQ
ALIALAQDRTIRTAPEKVYLAQDVLVAIPDLLEPKDPDMLVAALNAPLTRLYGGMKWEAHPPQPKEINPIKVTLYVGS
KERLERVAEARSVSIKLAKAYIARLIFELNGFTLEETRMTTTVKPTQSTKVLSWADEVEEVEALKGPYAAPPVEPIVF
EQAPNLEAWMIEYDLVPDRLFPILWRYAVASEEPTEVVFARLLSKKQEDEAKAQSGSGGPIHRDPPEDQRSRRSRLSV
NQRQRQNRALNRRRRGPPRTDP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative RNA dependent RNA polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1083,
                    id gi 067065065076257741,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25775", version 1}, gi 067065065076257751
          },
          descr {
            title "MAG: Capsid protein alpha [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 420,
            seq-data iupacaa "MPSRKKNVNSCICPHDGKQFSTRAALQQHKKMVHASPNETRPAPQPRR
RPRRRSGNGGALSSDLAPSRVPTVRNSAITTSGSDKVLVFTIKAQQSLIKSIPIHPGTIPRLSNLAKSFQRITWRSLA
VHVSPQVSTSINGGYVAGIVTDPDDEHITASDLSSTAGSQTKKWYQDAIIRMPLKTDKLYTSAGEEPRFSSPGTFWIC
SEGNPSSDLTVVVTFRWTVHLEGSTLEDDATSSFVLSGSLNSIGGKSIMGYKACGSTTVVEDVSGLIPAPIREVPGTH
FFRVPTYTVEYQEGVGDTGTIQMHFVAYKTDTKNFHFSEDGSSINASNWQADVDNQVLCSDGTYFKYTGQGNACKVAS
TAAPRSSPSHLKRHSREKLMTLSRKVASLESSLKKFEMLSQRDSMTSSPELIPNPENLEL"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Capsid protein alpha"
                    }
                  },
                  location int {
                    from 0,
                    to 419,
                    id gi 067065065076257751
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25776", version 1}, gi 067065065076257761
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 83,
            seq-data iupacaa "MQGGVDGSPPVVTFPSEAALTGKIDDLVAESGKSRVILEEIRDALAKR
LDDLESRIDSKPGKFGTIEIASVPPIVGEYFIENF"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 82,
                    id gi 067065065076257761
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame three,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076257741,
              location int {
                from 0,
                to 3256,
                strand plus,
                id gi 0670650651119791,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257751,
              location int {
                from 3297,
                to 4559,
                strand plus,
                id gi 0670650651119791
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076257761,
              location int {
                from 4361,
                to 4612,
                strand plus,
                id gi 0670650651119791
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}