Tolivirales isolate Mosquito/KenyaLow2/2023/Toli-like_virus:segment:RNA2 Capsid protein (capsid) and Matrix protein (Matrix) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Tolivirales",
orgname {
mod {
{
subtype isolate,
subname "Mosquito/KenyaLow2/2023/Toli-like_virus:segment:RNA2"
},
{
subtype nat-host,
subname "Culicidae; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
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label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
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{
label str "Sequencing Technology",
data str "Illumina"
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{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
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}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111988", version 1}, gi 0670650651119881
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
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{label str "LeaveParenthetical", data bool TRUE},
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{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
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}
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},
inst {
repr raw,
mol rna,
length 1809,
topology linear,
strand ss,
seq-data ncbi4na '424288424488424228288288442144142444884284288188
288142112288811242842112884142148211142188812284888288211284888428218848411881
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1148484221148848212881812121828412428422412480'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "capsid"
},
location int {
from 200,
to 862,
strand plus,
id gi 0670650651119881
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Capsid protein"
},
location int {
from 200,
to 862,
strand plus,
id gi 0670650651119881
},
xref {
{
data gene {
locus "capsid"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "Matrix"
},
location int {
from 998,
to 1690,
strand plus,
id gi 0670650651119881
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "Matrix protein"
},
location int {
from 998,
to 1690,
strand plus,
id gi 0670650651119881
},
xref {
{
data gene {
locus "Matrix"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25793", version 1}, gi 067065065076257931
},
descr {
title "MAG: Capsid protein [Tolivirales]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 220,
seq-data iupacaa "MSKQLKKQVNALTAQVAALKVAKNKQQPAPAKKRRNRKRGAGSSLANT
GISADGRIVVQRCELLFEIKVDEGKEGAAYYEVLQATSSRMPWLSKLTKNFSQIVWKSARLEYRPAVGTMKDGSLVVG
IDWNPISSSPDKAKVQSMTPNFQVPVWQKKEMTIPSSRLQSRKFYSTDSSSSTDIIDKVPCEVLAYISCTKDAVNKQY
FGDIWIHYNVILQGPT"
},
annot {
{
data ftable {
{
data prot {
name {
"Capsid protein"
}
},
location int {
from 0,
to 219,
id gi 067065065076257931
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25794", version 1}, gi 067065065076257941
},
descr {
title "MAG: Matrix protein [Tolivirales]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 230,
seq-data iupacaa "MAPAPYQSEVFWPYQKVVLNRDLIEFTGTNNFTISGKDFDYTDAYAVS
ADRQEDGHETTLDFVSKPPEYNVVPFGVLDFTLSIKSPHFPRVAMYECSIMLTSDRNIFDPKRIXAIDVAFAESASVK
VIGDVLNIYKCDLRRLDNWFMIKFCQILEILDPKVSVKVRVRINRLGNNTGIDLGTRLDVTPVLSWYNSITKFLRVES
NGEGSDGSLSAQHESYESRTSDSPTS"
},
annot {
{
data ftable {
{
data prot {
name {
"Matrix protein"
}
},
location int {
from 0,
to 229,
id gi 067065065076257941
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076257931,
location int {
from 200,
to 862,
strand plus,
id gi 0670650651119881
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076257941,
location int {
from 998,
to 1690,
strand plus,
id gi 0670650651119881
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}