Partitiviridae isolate Culex/MsambweniMCF4/2021/partiti-like_virus-2:segment:1 RNA dependent RNA polymerase (RdRp) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Partitiviridae",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/MsambweniMCF4/2021/partiti-like_virus-2:segme
nt:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Msambweni"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2021"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA112006", version 1}, gi 0670650651120061
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1443,
            topology linear,
            strand ss,
            seq-data ncbi4na '421141848188124881182488281414488884411842422211
124812222412228222218184212114282848884414141148828281284282481418244118841448
881488811821141184121848841141844418221182241211881882484184124118884418184814
8124842142284441811F8821484841282214841122211822122841124181828884181844188844
121882421148221482224412822248442142212148121111242424424114881844128482214124
281441218241822412428128442122421881144214414114122841212284184188481144848848
182424212181822141414184112241141822414214848184418182241284281821218841844144
218428884212822288841824124148121141114411141242248844288124418124181844244884
484414228121112822428282481821141148182418188824418481824128888221428824181141
214818244242148841811141814218828221812824112141124844121812412418122111142184
481812214124211481412848122414218444128122844841148188882844141282242822448848
481124424111448441141141114284484882211484418228128821222142884824188221824881
188441888841821128184218822821141418824411441842214114188422844828884424184188
244814848221421121422128828242844144141811484422112848244114284421841224811124
8841811182218881212112284248241841148441488828244188814418141F4484488882228482
481422824111448441844144282848122182214118442214124144188444121848824221482444
228814448848828124241124244414841184442148888222141818422481121884814414882484
248881241811182822282414121214282421848812441182824421811441881284188428212221
8828122828222841448828448421224428188484218184114148148224811281824480'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1420,
                    strand plus,
                    id gi 0670650651120061,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1420,
                    strand plus,
                    id gi 0670650651120061,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25828", version 1}, gi 067065065076258281
          },
          descr {
            title "MAG: RNA dependent RNA polymerase, partial [Partitiviridae]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 472,
            seq-data iupacaa "KMYYVNRSRGFGMRPNVPRPSPYAQALFGEKFSTARRSELRFSLIKND
MLKMGSNPTIIRDDEFGYVVRAAWDXFSVTPVNPIHLNDIFDMDLDIRKSSPGLPWQPQYKTRGEVMDCPDARTSIRR
YWHRIKAGEDLTPDDCKVLYRAHIQRDEPKIRAVYGYPTAITLMEACFALPLIDEYKKGKTPLAYGYDMAVGGAYKLR
SRIKKYRYFGCIDFSSFDKTVSAQLIKIAFSILEQNVDIRRYQKHGIPDASRLYRAWDYLVKYFLETPLRLCNGERWK
KKAGVPSGSYFTQLVDSIVNWILINYAFLKRFGRMPEDCLVFGDDSVVSSNSHFSLEEISGQLSEAGMTVNVDKSIYT
TCVDEVEFLGFRIXGGFPCRSLERWMEALYHPEWPDEDWDMFASRALGLFYANAGVNGQFSQICRNIVGVRAFTINLP
RDTARMLRNLGIRITDCSPILPLPEVLVHRLLCI"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 471,
                    id gi 067065065076258281,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame three,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076258281,
              location int {
                from 0,
                to 1420,
                strand plus,
                id gi 0670650651120061,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}