Riboviria isolate Culex/MsambweniMCF4/2021/Hubei_virus:segment:1 Putative serine protease (serineprotease1), Serine protease (serineprotease2), and RNA dependent RNA polymerase (RdRp) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Riboviria",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/MsambweniMCF4/2021/Hubei_virus:segment:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Msambweni"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2021"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA112007", version 1}, gi 0670650651120071
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 3334,
            topology linear,
            strand ss,
            seq-data ncbi4na '481141122112148144484121818148224144128118828418
482111118822182181841182182488281882182182428884148441188188811411121882484188
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84218181224441841111121811448141128811112882142888841F488441214448418812422842
842141418228181214181124214144281442884828111441111282824118484428188214111418
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488411818121448148122428111441888148441424228818818888441241184188888448184218
88144142841282F482112181442818412424421888884114148411288141221142244488188114
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244182214112224882882288284114141114884141884884184114144114144882212114142282
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842821444282244284824184284444222F84421144848482142144842284882148122114422142
241818182222111844828882218122242212288844841188122181844118222428248241842284
882242111124814288821242421212111411121411121412414284222422112142141141124112
814142148121412142428124482281842111184424484241228212142142282241222241242884
488241224141488211211242118411441418141818411114812822844181884818188412881881
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284214448442824241488444822221188248228422811488441142228241818818411821122111
8841882488818844488282882282881144841414118144418414884421112188821244811FFF44
811128188121211144411118111424188412482124181444142281184221848448144822122144
4228888882'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "serineprotease1"
                  },
                  location int {
                    from 171,
                    to 1457,
                    strand plus,
                    id gi 0670650651120071
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Putative serine protease"
                  },
                  location int {
                    from 171,
                    to 1457,
                    strand plus,
                    id gi 0670650651120071
                  },
                  xref {
                    {
                      data gene {
                        locus "serineprotease1"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "serineprotease2"
                  },
                  location int {
                    from 1568,
                    to 2104,
                    strand plus,
                    id gi 0670650651120071
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Serine protease"
                  },
                  location int {
                    from 1568,
                    to 2104,
                    strand plus,
                    id gi 0670650651120071
                  },
                  xref {
                    {
                      data gene {
                        locus "serineprotease2"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "RdRp"
                  },
                  location int {
                    from 2101,
                    to 3171,
                    strand plus,
                    id gi 0670650651120071
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  location int {
                    from 2101,
                    to 3171,
                    strand plus,
                    id gi 0670650651120071
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25825", version 1}, gi 067065065076258251
          },
          descr {
            title "MAG: Putative serine protease [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 428,
            seq-data iupacaa "MMNRTMIHMMEFLTSELVLGLYVTLLLVLTLVAFNVINPCHKAMVMIS
FVTILVALVRSLAYLALGYIDLAFASFVARLGRFRYWNPFYSLKDPNYDLLIFYITVLIVIAMYFSRRQYNRRKHEYY
LLTQAGKFECEKAMPNSNYEIVPVLPSFQATVLVSLDGVKYAENGQCFWVDEGLLTSAHVIEGYEYCCIYRDEKHKVE
LKTSAFXVGQGDYACCRDPIQITQRLGLSKGKLSNVAIQKDSGLSVNVTAFGKRSIGFLNQHPQFGFVEYTGSTAKGF
SGAPYYFGRMIFGMHLGADSVNIGYDAAFLKSELRPSRVIKSLINLQQEDSASWLVEQLDRQDDVQYWQSPFDPSEFK
VRVGNMYHIVDGAVLDEIMSKRKIRKNVGKIDYLSELSVQKRIQNPFFLLKRKLRLLMKRKRFHKSLR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative serine protease"
                    }
                  },
                  location int {
                    from 0,
                    to 427,
                    id gi 067065065076258251
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25826", version 1}, gi 067065065076258261
          },
          descr {
            title "MAG: Serine protease [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 178,
            seq-data iupacaa "MMKEFGRTSVYTALRLEKEAVETLPEPLQPEVVKQPQAAKQPEVVKVD
ELPLAPRDAMTFNDSGNLLRAPAVDAGAXGKVCQQVPVQYQGQPIYPQMVFPYPPPLVNYHMESRSSMPVPQNVAFTR
TQRNRNRRAARQQQKNELEQYRQRYGPMQNGGATSQQPPTPTLGSTESSTTQ"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Serine protease"
                    }
                  },
                  location int {
                    from 0,
                    to 177,
                    id gi 067065065076258261
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25827", version 1}, gi 067065065076258271
          },
          descr {
            title "MAG: RNA dependent RNA polymerase [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 356,
            seq-data iupacaa "MKEIDMKSTPGYCILTYYGSNNAQIFGWNGMACDPDRVSMVRQHVKLR
FDQLLAGNPISDDIKVFVKQEPHKLKKIQDGTYRLISAVSLIDTFIDRILFAWIARVQLDTVGKTPCLVGWSPVRGGW
RAIQNRFANSPVVCLDRSAWDWTVQGYLVDLWLQFLENLPVNPPKWWISVMKLRFKLLFEDVWFKFEDGTRVKQMTRG
VMKSGCYLTIILNSLSQSLLHYIANLRCGRPMAEKQPYSIGDDTVQEAFDWLEDYVKQLEMLGVTVKGAKVQNWVEFA
GFCFDGKTCYPAYWQKFLFNLSHTQRLGETLLSYQYLYVNEPVMYEFICRVARELGPQFVLPKLEALDIMNQPN"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  location int {
                    from 0,
                    to 355,
                    id gi 067065065076258271
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076258251,
              location int {
                from 171,
                to 1457,
                strand plus,
                id gi 0670650651120071
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076258261,
              location int {
                from 1568,
                to 2104,
                strand plus,
                id gi 0670650651120071
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076258271,
              location int {
                from 2101,
                to 3171,
                strand plus,
                id gi 0670650651120071
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}