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Iflavirus isolate Culex/MsambweniMCF4/2021/iflavirus-3 Polyprotein (Polyprotein) gene, partial cds.

Accession:
C_AA112013.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Iflavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/MsambweniMCF4/2021/iflavirus-3"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Msambweni"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2021"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA112013", version 1}, gi 0670650651120131
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1373,
            topology linear,
            strand ss,
            seq-data ncbi2na '7D22BF545AFBFD767803514B0A7E76E3D0538B8CD8200D4A
D7D3FDD9FEC4C112780592A468FF71283FF1E99A24F3FF483E9041DE8031CFD9001D9C13A8B8FD
765A3FCB7F50CD787BDC3108B4A13E7C70B507E8013F73ADFF9CDBDD0C076BF8CA7C0EF3D700C1
37E5D904EBF1E73779F77834151CCA25B22F10A17D608A01DF54D83F3E53DC347A2C90677FAEC0
20E808E10036049C203F1A31FF089DFE43EAC71FE2E5FFE0271EB027FC2EDEFD01E7CF1EBCB068
830239CB1CCFE77C7B078F77EFDC3E8E020B23F7C1E363765B81F307D615B73D071BB18B27C4FB
2B6C8F93952F0FFAB0236D81F75FC17FCFF0D03C02BECE28BF9E00EBFF74533DB0205FFBCFC6DC
EB004ECFA00D10390DE1F39DC071D974803340BE3AD53AFCC7B1510FD15F4EDE8F020125EC3E7B
6384E38BB9F3D78B77D807AFC77EFF600E51FB9F7FC85433A49CD82002003CBE00E23DEC7D0F70
5380D3414E39CD40'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "Polyprotein"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1372,
                    strand plus,
                    id gi 0670650651120131,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Polyprotein"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1372,
                    strand plus,
                    id gi 0670650651120131,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "Polyprotein"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25836", version 1}, gi 067065065076258361
          },
          descr {
            title "MAG: Polyprotein, partial [Iflavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-ends
            }
          },
          inst {
            repr raw,
            mol aa,
            length 457,
            seq-data iupacaa "FRGFPPVVFLAENPPVRLARDSTMSDIEENPGPSFSRFVHNTAETAGH
GFSTGIFTGAEHYFSELATTLENTISQKLANMGVISSPDFSLSNILTVLIQESGHCLLSPTWKTFLWSFAIVLNKLGL
IGLNVIPKITSCLATWFTAISASLNQPTIGAVELQGPSEEETLPIEFIAILITGVATLFGVKEWKDDKNRTAKKFTDT
FKSSLQLGTTLSAFLKATGKAFKCLFQTAYYWLVTENKDASTIFALTVTDSLVSNWMKEVDFLTDRSRRELITSDPSI
QLRVRVAYIVGRRLHAQLILGKDRRTSPLTFYFNQIKRLYEEFAENGFSHHIRKEPFVIYVYGKTCIGKSQMQSDLCS
KLLASENIKVDGPMVYTVPTISPFMSGLKKQPVIAVDDMMSVLIPESLRNWFTLVFENATCASFRPNMAAIEEKEKLV
ENEILYFNSNHEIINHDAI"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Polyprotein"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 456,
                    id gi 067065065076258361,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076258361,
              location int {
                from 0,
                to 1372,
                strand plus,
                id gi 0670650651120131,
                fuzz-from lim lt,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
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