Partitiviridae isolate Aedes/UkundaUAF4/2021/partiti-like_virus-2:segment:2 Putative capsid protein (capsid) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Partitiviridae",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Aedes/UkundaUAF4/2021/partiti-like_virus-2:segment:2"
                },
                {
                  subtype nat-host,
                  subname "Aedes; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Ukunda"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2021"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA112023", version 1}, gi 0670650651120231
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1345,
            topology linear,
            strand ss,
            seq-data ncbi2na '23815DD94A68D464D6DB01482E8EA8968FFDD40037351CBF
45197081855E633219FF26F921F369BEA3D7406EC5A2F1AF03C75A33F6374D8353716A138ED508
5BCFA3D9A6C12090EE86C71E4439FFBA888FB1F6F2244D00623177869333E3FC0D013951283F93
D70A6365BB17F498DA17B488D4076200E93B09B5780F8619E7B43AEC928FFDA273478E41914CFC
EB246534528B279B3DEC77182F903515A2F88EE987D6B283045A59217139DD4171989FC76AC6E5
0816D58C1D088D2033731607E83609AFC63AE13D08FE0E33E4FEA681FC1A8F57DECD81C74846ED
8602D92ADC0397D8D36854F88B82DAF543640FA31BAD9C18E148E5580746D6190A0FBB41CAD731
52FAF99D665127BE737F09762C8339C3317603C4DC48FE2221B6D5D79FABE419E0444BD0F3ADA5
20E8D0FC8C4FE8F0B82F8E82A5BAD2E0CEFA01303D1B6F23A7F7889D578280102B01590A009B05
40'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "capsid"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1281,
                    strand plus,
                    id gi 0670650651120231,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Putative capsid protein"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1281,
                    strand plus,
                    id gi 0670650651120231,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25850", version 1}, gi 067065065076258501
          },
          descr {
            title "MAG: Putative capsid protein, partial [Partitiviridae]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 426,
            seq-data iupacaa "DEPSRQADPRIRRKPEVDGEPDFSPKNLSTSFTTPKNDPCDIDAFSVA
DLSALGFLKRVPELRLNYSGYFDLIESIYRDMMSQDRYWIRGVTEAMWTYYCTMLLWERLYFVRAHQNEIPLTAYIDF
KSNMPTGICIPKAIAVYLSAIGPVRDPNSRKWHVSVPEIDDAAVNGVAGFFGAITDATHHIYGSTPSPGVAAYSVLYE
VANPPGVEMWRLPVGITPAADLHALQPTRALLGYVPRTVPITQEIRNIYTELGIEAVYDGDIQDLNDIAFGRNFNGIP
FCIELLRHVSTKVAGSKMPSIIGPIESEVGSQSQIGYVVANDDQMPRNSRPTQGIVSTRSYTQLVALRATAVAIFKPR
VEYANIPRNYIYRFERDVVPPAWVATLNTQFNYGRPEWINLDTFGLSEVDGRAVVSEYVGNINSRR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Putative capsid protein"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 425,
                    id gi 067065065076258501,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076258501,
              location int {
                from 0,
                to 1281,
                strand plus,
                id gi 0670650651120231,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}