Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/FJ80817/2025 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Lin",
first "Qi",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Fujian Provincial Center for Disease Control and Prevention",
div "Institute for the Prevention and Control of Infectious Diseases",
city "Fuzhou",
country "China",
street "No.386 Chongan Road",
email "603089356@qq.com",
postal-code "350012"
}
}
},
cit {
authors {
names std {
{
name name {
last "Lin",
first "QI",
initials "Q."
}
}
},
affil std {
affil "Fujian Provincial Center for Disease Control and Prevention",
div "Institute for the Prevention and Control of Infectious Diseases",
city "Fuzhou",
sub "Fujian",
country "China",
street "No.386 Chongan Road",
postal-code "350012"
}
},
date std {
year 2025,
month 10,
day 11
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Severe acute respiratory syndrome coronavirus 2",
orgname {
mod {
{
subtype isolate,
subname "SARS-CoV-2/human/CHN/FJ80817/2025"
},
{
subtype nat-host,
subname "Homo sapiens; Host_age: 1 year; Host_age_unit:
year; Host_sex: Female"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "China:Fujian,Putian"
},
{
subtype isolation-source,
name "oronasopharynx"
},
{
subtype collection-date,
name "2025-09-15"
},
{
subtype other,
name "Passage_details/history: Original; Sampling_Strategy:
Sentinel surveillance (ILI); Patient_status: Released"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "CLC v. 23.0"
},
{
label str "Sequencing Technology",
data str "Illumina; MGI; Nanopore"
},
{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 10,
day 11
}
},
seq-set {
seq {
id {
genbank { accession "C_AA120542", version 1}, gi 0670650651205421
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 6,
data strs {"isolate","cultivar","breed","ecotype","strain","variety" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 29793,
topology linear,
strand ss,
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15ED714FC38EBBF3FE7D47882DC130C229E8FFEB1C7F23D82152D5C7CFBC30671C3BFF3C0B7B83
F43FEC38D4FFE8EFC510010402FA3A02E2D28BF3DCB9830F91FF833B77497FDF3A17E0A0048B0F
D0037CA83FBBF0833E3AF3FC0333DC24465CF32A6E3F574ABFF69FC814FAC8FE50CACF04D1CAFD
01FC7E7F0320BCFE1D7AE3DF7D2BE849EB9E48F3CEEAF37D05CA1FF73C0330E00E814F1239EC87
B91F8577748040BB1BE035F47B20028373407DC1FC8B505048373EF23F5C3BC407EE57FD382FFC
194523F937BF39FA04A18834907BBE78F3DED7330FD914FFD9FF0BBCE8BB75C703C0E3779FC70E
DCE48F4FEC3C0AC382D25036752A407A033E78F30F303C5238FF129E6F337E83DC109F8F70932E
B0F38F1EB3236F0A0B701D017FE22233F41E03734A5AC1117EC0AC0AD70FBC7F5FC834CEBF5854
7CEBBEB45053122CB2C7F7FE07DC4E45241EFEE85C00B71C3FAF00103BB43F41F43AFC12912BBD
F1C2DC1002FDE5FD410FE92213EF8471E39ED6E351211F88F7E13C453BDFFAEBB4BBCC114A040C
7DC14AF9EF7F34ABBC1E4482DDEF9CF4E48D07C75C7E9BBF3DC4AF70EFFD011B929EFC32A9E0CE
D041D338BB84C54FAE4ACCE672F34874870B76DA6A46CBB272D0D4D3E5C473B47EB9200F4BE7C7
70C1DCF94C5440FF1CF2EF14480F714BB7385084D2C8FB10EC4FEEB8F41E0E490DFFBE433A4BFF
B110F006E7F07A0C9EF810840045420BFF910B4040FC4011450F033FEBAFF0FFD1033C52353401
42422B4FCF82371FF4102E11F9239E9F4D010CEB8F97EB8CF9E722174FEE4402FC1A5F1EFF945F
E7448E038F9D0C47DE47BC9AB10D1F7AFA17FAE4AE793C40C53F9CE40E9F32BF0EB3E8BC4483BD
DCE205003E3E5050FC32E73E900F421D1FFF51242E47E801F423BAD0530E4427F0119FBC041F27
503FAE43F42EFF038CD7F46DF840BE29E0B903E32BE344A487D02FE484CEE1D043C3C89E480D22
7DE70DF9E71C03B48BBB1FA10D0022F8FFEE80A9CD37CED7D5D2D245D3AECB7DF93B87CED5E442
0001F441E75E53FB4E3A00911FD76E0AEDFEFD03A4447AFEC110283FF381440D3C7121044FEEDE
B07B8EFB0CA0FB41044BF38D7F907E0F23D3D0A28BC8C0CFF0834C4D148EF8FCAE1377A4F0E7D2
FB013D00203E165D0E2BE5083F0383774D8DD4207E80B3892CCC03A53ACCFE9CAFF327A7E3E532
C3AE10F39FE7B3852F9ECBEDD0A9EFBDFBA35E7903F8E0861DE252E740A2D03C4F1130181F3A3F
BF38837D10FA07B07F8242B80D0A39C75F48FFBD99C7D06316310974757F68E9F3EFA6F91F7E7B
FF4899F500D307740088E907247750ABBD1FEFE41F9EFBEFEC12FC744DFF9DBE79E97E0957FDDC
DFCE7F2DC7DF922CC07FB0830C38A7FA7F9E80E53D40054F1FCE3941CFF7F9E931C3EF1873ECC5
F10CBB07DF43ED3C7D2B8E91042D73F781387148FAEBCC7800EA0DE8B0087BBECF112F1F47D21C
F149EC741D0F8B1213EBBE04EF17DF4DC4300FBE38978204ED40F444361AF4D68BEF0D4B0E8143
F38E05861871C9B97FB09109E38B181F3B1D3DBF682232B1BC32F0C9B1F7FF7E7F6EB3DF9CBC47
2535F1E67D8FBB9B1E790CFBC1B8B7EC017DFFC6FC776EF003783DF722F5E37DEB70181C0CF33C
BFF7BFA07F0FF253A44F706B1CF16F8227C009D7E083A05CB0CAFD73D7E4E8FEDF710FE5CE504A
0CAFFECCC3C2F0FFDDE9EF3A52C1FC1FBFEE7E79EFC48303E8D16BA0F9CD90E9FB7ECA7E3BA749
C7D3E7DFD21EFEE6C66F53BAD3F0D480704F7DD06E51D4E91CF7852167DC80B81DB0DA27B8D7DB
A137DB3E7A114DCA19EE134285E5C080D1EF9C4D1819FDF3C40FA89F649BB24AE1D2BFE79312D9
C4A3E907303C044853D4B24B8433E7F9FB12C2E1048EFD376F87F4AF1CC92233C70F3CE687FC0B
F53FA0DF8F134C05D30F003F370B4707883033DD0F238224143A23DDC0604E00F3DFF7E91E3047
671FB89FCD1C508BBBC8AC412C7FC0205F9DF7A04C62A43D14FD35DC9E3040FE4787E7F24743F9
FF9FB5E1A6C011B734BC6E5234BF45C07BD34842282F4207F1DD43FF7CFBE690CBBF3047F9F447
40202120E3E07F4F0F87DCFEE7FF35FDEF1D7EFF0F39F3CDFFAF747E07908D30E01FB465C0604E
03F7EFF7CA0D3441EC9E4FD1420ECBF12D3B1D04D0533B2F8E15BB5CF47DCF703ACCF22CA27200
D245FC3E0FB9BA38A7AF703454F4B136336B0F312FD7BF17FC43C3E5281703EACB7ECB9BEF6F73
821FFC8B34E1BDBBEFF23F4DC060407C0EDE30E855005260391D64F1BFAE85748F41E92C1483AE
A998D0041B69542BF150C31E6DFAFC59DD1D04E90A085F03D5D8A12A6F50F0450C92D48E140FA7
1C5822714860F6EBAE1AC03808DD2D423ACFDC717281EA5209E87D5CEB9C1021A4D33ABE41E2A2
5F8311402344FA456435E70439E436E7107D7428104F94029F71920A89229A4B425DF76F5D346C
B6412F4203D0752924B0181F75E720E9E90E9AE39E77E7F1E79F848F8149F88900EDEB02941041
0A401ED1C20379E78A7DC209769001B1E51C09310EC1109FDA486EB5204054280FFAA14A070D21
0A07871013E9640F910FE55499F49BDF683B664FA4E82D117DA81BAF85C44AE5340FA38408D40F
D02342D3FE7830933E1931004F545048970028400820A78E01D097C5922120804901EE1DF7D79E
48FE8E3F75010F904353896E78741D29701D39214442923A9CCC06FF67FD6FC63332DC77EE4838
3DDB07132442C8ECBC1FC3744C90DFC34BBB04F2A287E0225144FF45C4B810E72A2279733A0895
C3BB00F0FF2CB9CD54EE3FC327DF00'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1ab"
},
location int {
from 257,
to 21534,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 1
},
{
id local id 3
}
}
},
{
id local id 5,
data gene {
locus "S"
},
location int {
from 21542,
to 25351,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 4
}
}
},
{
id local id 7,
data gene {
locus "ORF3a"
},
location int {
from 25360,
to 26187,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 6
}
}
},
{
id local id 9,
data gene {
locus "E"
},
location int {
from 26212,
to 26439,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 8
}
}
},
{
id local id 11,
data gene {
locus "M"
},
location int {
from 26490,
to 27158,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 10
}
}
},
{
id local id 13,
data gene {
locus "ORF6"
},
location int {
from 27169,
to 27354,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 12
}
}
},
{
id local id 15,
data gene {
locus "ORF7a"
},
location int {
from 27361,
to 27726,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 14
}
}
},
{
id local id 17,
data gene {
locus "ORF7b"
},
location int {
from 27723,
to 27854,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 16
}
}
},
{
id local id 19,
data gene {
locus "ORF8"
},
location int {
from 27861,
to 28226,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 18
}
}
},
{
id local id 21,
data gene {
locus "N"
},
location int {
from 28241,
to 29491,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 20
}
}
},
{
id local id 23,
data gene {
locus "ORF10"
},
location int {
from 29516,
to 29632,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 22
}
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 1",
location int {
from 13455,
to 13482,
strand plus,
id gi 0670650651205421
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 2",
location int {
from 13467,
to 13521,
strand plus,
id gi 0670650651205421
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 1",
location int {
from 29567,
to 29602,
strand plus,
id gi 0670650651205421
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 2",
location int {
from 29587,
to 29615,
strand plus,
id gi 0670650651205421
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' stem-loop II-like motif (s2m)",
location int {
from 29686,
to 29700,
strand plus,
id gi 0670650651205421
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69094", version 1}, gi 067065065076690941
},
descr {
title "ORF1ab polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 7092,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLRD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
GNKGAGGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDL
LARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIK
TIQPRVEKKKLDGFMGRIRFVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYL
PQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGV
VGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKA
KKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNN
LVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIK
ESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTE
VLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDD
TVIEVQGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYY
LFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDS
QQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAAN
VYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQ
YEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVL
TAVVIPTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWN
LREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGY
VTHGLNLEEAARYMRSLKVPVTVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKR
GDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIK
PHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQI
ALKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG
VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSK
ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPY
PNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNAT
NKATYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDII
LKQANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTT
NIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIW
FLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCIGSIPCSVCLSGLDSLDTYPSLETIQIT
ISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFA
SFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFIS
DEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFD
GKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHIN
AQVAKSHNVALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLKVTLV
FLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAV
ITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYD
TNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRS
LPGVFCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIV
LCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNG
VSFSTFEEAALCTFLLNKEMYLKLRSDVLLPFTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSD
VLYQPPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKS
NHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSF
LNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRW
FLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV
VRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLC
LFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLV
YKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGL
FCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLS
VLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLP
SYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQ
TMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKI
VQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLS
DLQDLKWARFSKSDGTGTIYTELEPPCRFVTDTLKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANS
TVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGF
CDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTST
DVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRI
DGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQ
ALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT
KPYIKWDLLKYDFTEERLKLFYRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPLTSFGPLVRKIFVDGVPF
VVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKD
FYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVN
NLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQK
LLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRF
YRLANECAQVLSEMVMCGSSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC
LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKG
PHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQ
YIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYD
HVIPTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIA
TCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVT
KNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNV
ANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFD
KFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLCAKHYVYIGDPAQLPAPRTLLTKGTLEPEYF
NSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFL
TRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSD
RDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDVPGIPKDMTYRRLI
SMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDF
SRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCD
RRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKR
VDWTIEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELF
YSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFF
YYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTF
TRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNN
LGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPIETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQ
PSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGY
AFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKS
QDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGI
MMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATV
HTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTN
VNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSL
LSKGRLIIRENNRVVISSDVLVNN"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1ab polyprotein"
}
},
location int {
from 0,
to 7091,
id gi 067065065076690941
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 179,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 180,
to 817,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 818,
to 2762,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2763,
to 3261,
id gi 067065065076690941
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3262,
to 3567,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3568,
to 3854,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3855,
to 3937,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3938,
to 4135,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4136,
to 4248,
id gi 067065065076690941
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4249,
to 4387,
id gi 067065065076690941
}
},
{
data prot {
name {
"RNA-dependent RNA polymerase"
},
processed mature
},
location int {
from 4388,
to 5319,
id gi 067065065076690941
}
},
{
data prot {
name {
"helicase"
},
processed mature
},
location int {
from 5320,
to 5920,
id gi 067065065076690941
}
},
{
data prot {
name {
"3'-to-5' exonuclease"
},
processed mature
},
location int {
from 5921,
to 6447,
id gi 067065065076690941
}
},
{
data prot {
name {
"endoRNAse"
},
processed mature
},
location int {
from 6448,
to 6793,
id gi 067065065076690941
}
},
{
data prot {
name {
"2'-O-ribose methyltransferase"
},
processed mature
},
location int {
from 6794,
to 7091,
id gi 067065065076690941
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69098", version 1}, gi 067065065076690981
},
descr {
title "ORF1a polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 4401,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLRD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
GNKGAGGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDL
LARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIK
TIQPRVEKKKLDGFMGRIRFVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYL
PQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGV
VGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKA
KKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNN
LVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIK
ESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTE
VLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDD
TVIEVQGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYY
LFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDS
QQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAAN
VYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQ
YEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVL
TAVVIPTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWN
LREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGY
VTHGLNLEEAARYMRSLKVPVTVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKR
GDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIK
PHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQI
ALKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG
VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSK
ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPY
PNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNAT
NKATYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDII
LKQANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTT
NIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIW
FLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCIGSIPCSVCLSGLDSLDTYPSLETIQIT
ISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFA
SFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFIS
DEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFD
GKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHIN
AQVAKSHNVALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLKVTLV
FLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAV
ITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYD
TNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRS
LPGVFCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIV
LCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNG
VSFSTFEEAALCTFLLNKEMYLKLRSDVLLPFTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSD
VLYQPPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKS
NHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSF
LNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRW
FLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDV
VRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLC
LFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLV
YKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGL
FCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLS
VLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLP
SYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQ
TMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKI
VQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLS
DLQDLKWARFSKSDGTGTIYTELEPPCRFVTDTLKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANS
TVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGF
CDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNGFAV"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1a polyprotein"
}
},
location int {
from 0,
to 4400,
id gi 067065065076690981
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 179,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 180,
to 817,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 818,
to 2762,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2763,
to 3261,
id gi 067065065076690981
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3262,
to 3567,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3568,
to 3854,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3855,
to 3937,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3938,
to 4135,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4136,
to 4248,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4249,
to 4387,
id gi 067065065076690981
}
},
{
data prot {
name {
"nsp11"
},
processed mature
},
location int {
from 4388,
to 4400,
id gi 067065065076690981
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69099", version 1}, gi 067065065076690991
},
descr {
title "surface glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1269,
seq-data iupacaa "MFVFLVLLPLVSSQCVMPLFNLITTNQSYTNSFTRGVYYPDKVFRSSV
LHLTQDLFLPFSSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVF
IKVCEFQFCNDPFLDVYHKNNKSWMESESGVYSSANNCTFEYVSQPFLMDLEGKQSNFKNLREFVFKNIDGYFKIYSK
HTPIIGRDFPQGFSALEPLVDLPIGINITRFQTLLALNRSYLTPGDSSSGWTAGAADYYVGYLQPRTFLLKYNENGTI
TDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNVTNLCPFHEVFNATRFASVYAWNRTRISNCVA
DYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVISWNSNKL
DSKHSGNYDYWYRSLRKSKLKPFERDISTEIYQAGNTPCKGKGPNCYFPLESYGFRPTYGVGHQPYRVVVLSFELLHA
PATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTKSNKKFLPFQQFGRDIVDTTDAVRDPQTLEILDITPCSFGGVSVI
TPGTNTSNQVAVLYQGVNCTEVSVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQT
QTKSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLL
QYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAG
FIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIG
VTQNVLYENQKLIANQFNSAIGKIQDSLFSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVT
YVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQLE
LDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIA
GLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT"
},
annot {
{
data ftable {
{
data prot {
name {
"surface glycoprotein"
}
},
location int {
from 0,
to 1268,
id gi 067065065076690991
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69100", version 1}, gi 067065065076691001
},
descr {
title "ORF3a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 275,
seq-data iupacaa "MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATSTIPIQASLPFGWLIV
GVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMR
LWLCWKCHSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLH
SYFTSDYYQLYSTQLSTDIGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF3a protein"
}
},
location int {
from 0,
to 274,
id gi 067065065076691001
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69101", version 1}, gi 067065065076691011
},
descr {
title "envelope protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 75,
seq-data iupacaa "MYSFVSEEIGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVN
VSLVKPSFYVYSRVKNLNSSRVPDLLV"
},
annot {
{
data ftable {
{
data prot {
name {
"envelope protein"
}
},
location int {
from 0,
to 74,
id gi 067065065076691011
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69102", version 1}, gi 067065065076691021
},
descr {
title "membrane glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 222,
seq-data iupacaa "MAHSNGTITVEELKKLLEEWNLVIGFLFLAWICLLQFAYANRNRFLYI
IKLIFLWLLWPVTLTCFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFVRTRSMWSFNPETNILLNVPLHG
TILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
KLNTDHSSSSDNIALLVQ"
},
annot {
{
data ftable {
{
data prot {
name {
"membrane glycoprotein"
}
},
location int {
from 0,
to 221,
id gi 067065065076691021
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69103", version 1}, gi 067065065076691031
},
descr {
title "ORF6 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 61,
seq-data iupacaa "MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENK
YSQLDEEQPMEIL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF6 protein"
}
},
location int {
from 0,
to 60,
id gi 067065065076691031
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69104", version 1}, gi 067065065076691041
},
descr {
title "ORF7a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHP
LADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7a protein"
}
},
location int {
from 0,
to 120,
id gi 067065065076691041
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69105", version 1}, gi 067065065076691051
},
descr {
title "ORF7b [Severe acute respiratory syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 43,
seq-data iupacaa "MIELSLIDFYLCFLSFLLLLVLIMLIIFWFSLELQDHNETCHA"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7b"
}
},
location int {
from 0,
to 42,
id gi 067065065076691051
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69095", version 1}, gi 067065065076690951
},
descr {
title "ORF8 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIR
VGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDFI"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF8 protein"
}
},
location int {
from 0,
to 120,
id gi 067065065076690951
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69096", version 1}, gi 067065065076690961
},
descr {
title "nucleocapsid phosphoprotein [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 416,
seq-data iupacaa "MSDNGPQNQRNALRITFGGPSDSTGSNQNGGARSKQRRPQGLPNNTAS
WFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDG
IIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSKRTSP
ARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGKTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGN
FGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
PPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSRADSTQA"
},
annot {
{
data ftable {
{
data prot {
name {
"nucleocapsid phosphoprotein"
}
},
location int {
from 0,
to 415,
id gi 067065065076690961
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL69097", version 1}, gi 067065065076690971
},
descr {
title "ORF10 protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 38,
seq-data iupacaa "MGYINVFAFPFTIYSLLLCRMNSRNYIAQVDVVNFNLT"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF10 protein"
}
},
location int {
from 0,
to 37,
id gi 067065065076690971
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
except TRUE,
product whole gi 067065065076690941,
location mix {
int {
from 257,
to 13447,
strand plus,
id gi 0670650651205421
},
int {
from 13447,
to 21534,
strand plus,
id gi 0670650651205421
}
},
xref {
{
id local id 2
}
},
except-text "ribosomal slippage"
},
{
id local id 3,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076690981,
location int {
from 257,
to 13462,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 2
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076690991,
location int {
from 21542,
to 25351,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 5
}
}
},
{
id local id 6,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076691001,
location int {
from 25360,
to 26187,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 7
}
}
},
{
id local id 8,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076691011,
location int {
from 26212,
to 26439,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076691021,
location int {
from 26490,
to 27158,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 11
}
}
},
{
id local id 12,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076691031,
location int {
from 27169,
to 27354,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 13
}
}
},
{
id local id 14,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076691041,
location int {
from 27361,
to 27726,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 15
}
}
},
{
id local id 16,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076691051,
location int {
from 27723,
to 27854,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 17
}
}
},
{
id local id 18,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076690951,
location int {
from 27861,
to 28226,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 19
}
}
},
{
id local id 20,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076690961,
location int {
from 28241,
to 29491,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 21
}
}
},
{
id local id 22,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076690971,
location int {
from 29516,
to 29632,
strand plus,
id gi 0670650651205421
},
xref {
{
id local id 23
}
}
}
}
}
}
}
}
}