e.g., HRA000087; HRA000150
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HRA000212
   HRA000212.xlsx
Title:
Single cell RNA sequencing of bladder urothelial carcinoma
Release date:
2020-08-26
Description:
To investigate the microenvironment of bladder urothelial carcinoma, we performed single-cell RNA sequencing on 8 BC tumor samples and 3 para-tumor samples. We identified 19 different cell types in the BC microenvironment, indicating high intra-tumoral heterogeneity of bladder carcinoma.
Data Accessibility:   
Controlled access Request Data
BioProject:
PRJCA002909
Study type:
Disease Study
Disease name:
urinary bladder cancer
Data Access Committee

For each controlled access study, there is a corresponding Data Access Committee(DAC) to determine the access permissions. Access to actual data files is not managed by NGDC.


DAC NO.:
HDAC000139
DAC name:
DAC_KeChen
Contact person:
Ke Chen
Email:
shenke@hust.edu.cn
Description:
Wuhan Union Hospital, Huazhong University of Science and Technology
Individuals & samples
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
HRI040891BC1not collectedHRS047796BC110X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 01
HRI040892BC2not collectedHRS047797BC210X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 02
HRI040893BC3not collectedHRS047798BC310X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 03
HRI040894BC4not collectedHRS047799BC410X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 04
HRI040895BC5not collectedHRS047800BC510X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 05
HRI040896BC6not collectedHRS047801BC610X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 06
HRI040897BC7not collectedHRS047802BC710X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 07
HRI040898BC8not collectedHRS047803BC810X Genomics single cell RNA sequencing of urinary bladder cancer fresh sample of patient number 08
HRI040899Mucosa1not collectedHRS047804Mucosa110X Genomics single cell RNA sequencing of normal bladder mucosa 1
HRI040900Mucosa2not collectedHRS047805Mucosa210X Genomics single cell RNA sequencing of normal bladder mucosa 2
Showing 1 to 10 of 11 rows rows per page
Files
Request Data
Run accession
Files
Experiment
Experiment title
Platform
Sample
Run accession
Files
Experiment
Experiment title
Platform
Sample
HRR079356HRR079356_f1.fastq.gz (13.16 GB)HRX060427BC1Illumina HiSeq X TenHRS047796 (SAMC1387831)
HRR079356HRR079356_r2.fastq.gz (22.88 GB)HRX060427BC1Illumina HiSeq X TenHRS047796 (SAMC1387831)
HRR079357HRR079357_f1.fastq.gz (12.86 GB)HRX060428BC2Illumina HiSeq X TenHRS047797 (SAMC1387833)
HRR079357HRR079357_r2.fastq.gz (23.29 GB)HRX060428BC2Illumina HiSeq X TenHRS047797 (SAMC1387833)
HRR079358HRR079358_f1.fastq.gz (11.97 GB)HRX060429BC3Illumina HiSeq X TenHRS047798 (SAMC1387838)
HRR079358HRR079358_r2.fastq.gz (23.46 GB)HRX060429BC3Illumina HiSeq X TenHRS047798 (SAMC1387838)
HRR079359HRR079359_f1.fastq.gz (11.64 GB)HRX060430BC4Illumina HiSeq X TenHRS047799 (SAMC1387843)
HRR079359HRR079359_r2.fastq.gz (22.74 GB)HRX060430BC4Illumina HiSeq X TenHRS047799 (SAMC1387843)
HRR079360HRR079360_f1.fastq.gz (12.88 GB)HRX060431BC5Illumina HiSeq X TenHRS047800 (SAMC1387846)
HRR079360HRR079360_r2.fastq.gz (20.99 GB)HRX060431BC5Illumina HiSeq X TenHRS047800 (SAMC1387846)
Showing 1 to 10 of 22 rows rows per page
Submitter:   Ke Chen / shenke@hust.edu.cn
Organization:   Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology
Submission date:   2020-06-22
Requests:   117