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Experiment information
Accession CRX482206
Organism Salvia rosmarinus
Title Ro-HIC
BioProject PRJCA010408
BioSample SAMC818155
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
crosslinking cells with f digesting DNA with a suitable 4-cutter restriction enzyme Dpn II, filling ends and mark with biotin, ligating the resulting blunt-end fragments, purification and random shearing DNA into 300-500 bp fragments.After quality control test of the libraries using Qubit 2.0, an Agilent 2100 instrument (Agilent Technologies, CA, USA) and q-PCR, 150 bp PE sequencing of the Hi-C library were performed on the Illumina Novaseq 6000 platform. Hi-C GENOMIC PCR PAIRED
Processing Planned read length (bp) for mate 1: 100
Planned read length (bp) for mate 2: 100
Release date2024-08-08
Run
Run accession Run data file information
File nameFile size (MB)
CRR544044 CRR544044_f1.fq.gz
CRR544044_r2.fq.gz
43,791.47
45,588.11
SubmitterDanlu Han (danluhan@m.scnu.edu.cn)
OrganizationSouth China Normal University
Date submitted2022-08-11
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