- Scientific Name
- Taraxacum kok-saghyz
- Common Names
- -
- Bioproject
- PRJCA000437
- Biosample
- SAMC012932
- Accession No.
- GWHAAAA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
- Contact
- Tao Lin, tlin@genetics.ac.cn
- Sequence author(s)
- Tao Lin, Xia Xu
- Released Date
- 2017-09-20
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- SMART 2016-02
SSPACE 2014-01 - Sequencing & coverage
- PacBio RSII 48.0
- Download
- DNA GFF RNA Protein
- Publication(s)
- Tao Lin, et al. Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis. National Science Review. 2018, 5(1): 78- 87.
Statistics of Genome Assembly
| Genome size (bp) | 1,277,495,208 |
| GC content | 37.44% |
| Contig sequence No. | 31,965 |
| Maximum contig sequence length (bp) | 499,789 |
| Minimum contig sequence length (bp) | 4,865 |
| Average contig sequence length (bp) | 39,965 |
| Contig N50 (bp) | 47,631 |
| Contig N90 (bp) | 20,503 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 46,734 | 46,734 |