- Scientific Name
- Bombus ignitus
- Common Names
- -
- Bioproject
- PRJCA002292
- Biosample
- SAMC143364
- Accession No.
- GWHACCA00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR121550
- GVM variations of the species
- -
- Submitter Organization
- -, Institute of Apicultural Research, Chinese Academy of Agricultural Sciences
- Contact
- Cheng Sun(suncheng@caas.cn)
- Sequence author(s)
- Cheng Sun
- Released Date
- 2020-09-17
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- DISCOVAR de novo 52488
BESST 2.2.6 - Sequencing & coverage
- Illumina HiSeq 2500 100.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACCA00000000 | - | B.ignitus Scaffolds | Draft genome in scaffold level | 2020-09-17 |
DNA
GFF
RNA
CDS
Protein
|
| GWHACCA00000000.1 | - | BignChr | Draft genome in chromosome level | 2020-09-21 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 241,344,317 |
| GC content | 37.55% |
| Scaffold sequence No. | 3,134 |
| Maximum scaffold sequence length (bp) | 10,842,136 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 77,008 |
| Scaffold N50 (bp) | 3,022,841 |
| Scaffold N90 (bp) | 589,087 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 16,181 | 16,181 |