Genome Warehouse

Scientific Name: Brassica rapa
Common Names: field mustard;
Bioproject: PRJCA001831
Biosample: SAMC111314
Accession No.: GWHACCW00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: 11,856,138 (SNP), 4,322,343 (Indel)
Submitter Organization: Molecular and genetic Lab, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences
Contact: Xiaowu Wang, wangxaiowu@caas.cn
Sequence author(s): Xiaowu Wang
Released Date: 2021-05-14
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: MaSuRCA 3.2.6
Sequencing & coverage: Illumina HiSeq 2500 124.1
PacBio 29.1
Download: DNA GFF RNA CDS Protein
Publication(s): Xu Cai, et al. Impacts of allopolyploidization and structural variation on intraspecificdiversification in Brassica rapa. Genome Biology. 2021, 22.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHACCW00000000	-	WLD	Draft genome in chromosome level	2021-05-14	DNA GFF RNA CDS Protein

Genome size (bp)	423,642,538
GC content	37.60%
Genome sequence No.	304
Maximum genome sequence length (bp)	64,970,629
Minimum genome sequence length (bp)	1,258
Average genome sequence length (bp)	1,393,561
Genome sequence N50 (bp)	39,635,707
Genome sequence N90 (bp)	22,890,711

Annotation of Whole Genome Assembly

	Protein	Total
Total	46,180	46,180