- Scientific Name
- Hibiscus cannabinus
- Common Names
- bimli-jute, Indian-hemp, kenaf;
- Bioproject
- PRJCA000871
- Biosample
- SAMC036340
- Accession No.
- GWHACDB00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Agriculture, Fujian Agriculture and Forestry University
- Contact
- Liwu Zhang, lwzhang@fafu.edu.cn
- Sequence author(s)
- Liwu Zhang
- Released Date
- 2020-03-25
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- CANU CANU version 1.5
- Sequencing & coverage
- PacBio 77.0
- Download
- DNA GFF RNA Protein
- Publication(s)
- Liwu Zhang, et al. The genome of kenaf (Hibiscus cannabinus L.) provides insights into bast fibre and leaf shape biogenesis. Plant Biotechnology Journal. 2020.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACDB00000000 | - | Kenaf genome of Fuhong952 | Draft genome in scaffold level | 2020-03-25 |
DNA
GFF
RNA
Protein
|
| GWHACDB00000000.1 | - | Fuhong952 | Draft genome in scaffold level | 2021-07-01 |
DNA
GFF
RNA
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 1,071,941,171 |
| GC content | 35.38% |
| Chromosomes sequence No. | 18 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 65,740 | 65,740 |
| Total | 65,740 | 65,740 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 5,520 | 5,520 |
| chr10 | 3,040 | 3,040 |
| chr11 | 3,433 | 3,433 |
| chr12 | 3,241 | 3,241 |
| chr13 | 3,115 | 3,115 |
| chr14 | 2,840 | 2,840 |
| chr15 | 3,064 | 3,064 |
| chr16 | 3,142 | 3,142 |
| chr17 | 2,829 | 2,829 |
| chr18 | 2,711 | 2,711 |
| chr2 | 4,504 | 4,504 |
| chr3 | 4,711 | 4,711 |
| chr4 | 3,776 | 3,776 |
| chr5 | 3,723 | 3,723 |
| chr6 | 4,370 | 4,370 |
| chr7 | 4,673 | 4,673 |
| chr8 | 3,785 | 3,785 |
| chr9 | 3,263 | 3,263 |
| Total | 65,740 | 65,740 |