- Scientific Name
- Hibiscus cannabinus
- Common Names
- bimli-jute, Indian-hemp, kenaf;
- Bioproject
- PRJCA000871
- Biosample
- SAMC036340
- Accession No.
- GWHACDB00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Agriculture, Fujian Agriculture and Forestry University
- Contact
- Liwu Zhang, lwzhang@fafu.edu.cn
- Sequence author(s)
- Liwu Zhang
- Released Date
- 2021-07-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- CANU 1.5
- Sequencing & coverage
- PacBio 77.0
- Download
- DNA GFF RNA Protein
- Publication(s)
- Liwu Zhang, et al. The genome of kenaf (Hibiscus cannabinus L.) provides insights into bast fibre and leaf shape biogenesis. Plant Biotechnology Journal. 2020.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACDB00000000 | - | Kenaf genome of Fuhong952 | Draft genome in scaffold level | 2020-03-25 |
DNA
GFF
RNA
Protein
|
| GWHACDB00000000.1 | - | Fuhong952 | Draft genome in scaffold level | 2021-07-01 |
DNA
GFF
RNA
Protein
|
Statistics of Genome Assembly
| Genome size (bp) | 1,071,941,171 |
| GC content | 35.38% |
| Chromosomes sequence No. | 18 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 64,861 | 64,861 |
| Total | 64,861 | 64,861 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 5,621 | 5,621 |
| chr10 | 2,989 | 2,989 |
| chr11 | 3,348 | 3,348 |
| chr12 | 3,278 | 3,278 |
| chr13 | 3,028 | 3,028 |
| chr14 | 2,696 | 2,696 |
| chr15 | 3,005 | 3,005 |
| chr16 | 3,155 | 3,155 |
| chr17 | 2,755 | 2,755 |
| chr18 | 2,578 | 2,578 |
| chr2 | 4,330 | 4,330 |
| chr3 | 4,672 | 4,672 |
| chr4 | 3,951 | 3,951 |
| chr5 | 3,595 | 3,595 |
| chr6 | 4,422 | 4,422 |
| chr7 | 4,562 | 4,562 |
| chr8 | 3,743 | 3,743 |
| chr9 | 3,133 | 3,133 |
| Total | 64,861 | 64,861 |