- Scientific Name
- Populus alba var. pyramidalis
- Common Names
- Populus bolleana
- Bioproject
- PRJCA000905
- Biosample
- SAMC043126
- Accession No.
- GWHAAEP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Grassland Agro-Ecosystem, School of Life Sciences, Lanzhou University
- Contact
- JIanchao Ma, majch13@lzu.edu.cn
- Sequence author(s)
- JIanchao Ma
- Released Date
- 2018-06-11
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- plantanus version 1
- Sequencing & coverage
- Illumina HiSeq 2500 320.0
PacBio 30.0 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Jianchao Ma, et al. Genome sequence and genetic transformation of a widely distributed and cultivated poplar. Plant Biotechnology Journal. 2019, 17(2):451-460.
Statistics of Genome Assembly
| Genome size (bp) | 464,516,523 |
| GC content | 34.17% |
| Scaffold sequence No. | 17,797 |
| Maximum scaffold sequence length (bp) | 3,427,229 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 26,101 |
| Scaffold N50 (bp) | 459,178 |
| Scaffold N90 (bp) | 10,019 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 44,981 | 44,981 |