- Scientific Name
- Eucommia ulmoides
- Common Names
- -
- Bioproject
- PRJCA000677
- Biosample
- SAMC019574
- Accession No.
- GWHAAAL00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- -, Non-timber Forest Research and Development Center, Chinese Academy of Forestry
- Contact
- Tana Wuyun, tanatanan@163.com
- Sequence author(s)
- Tana Wuyun
- Released Date
- 2018-01-04
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Platanus v1.2.1
SSPACE v2.0
PBJelly2 v14.1.14 - Sequencing & coverage
- Illumina HiSeq 2000 93.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Ta-na Wuyun, et al. The hardy rubber tree genome provides insights into the evolution of polyisoprene biosynthesis. Molecular Plant. 2018, 11(3): 429- 442.
Statistics of Genome Assembly
| Genome size (bp) | 1,181,233,951 |
| GC content | 35.13% |
| Scaffold sequence No. | 29,152 |
| Maximum scaffold sequence length (bp) | 25,231,442 |
| Minimum scaffold sequence length (bp) | 270 |
| Average scaffold sequence length (bp) | 40,520 |
| Scaffold N50 (bp) | 1,879,877 |
| Scaffold N90 (bp) | 20,695 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 26,722 | 26,722 |