- Scientific Name
- Phyllostachys edulis
- Common Names
- kikko-chiku, mhousou, moso bamboo, mosochiku; Bambusa edulis, Bambusa heterocycla, Bambusa pubescens, Phyllostachys edulis var. heterocycla, Phyllostachys heterocycla f. pubescens, Phyllostachys heterocycla, Phyllostachys heterocycla var. pubescens, Phyllostachys pubescens, Phyllostachys pubescens var. heterocycla
- Bioproject
- PRJCA022610
- Biosample
- SAMC3304389
- Accession No.
- GWHJWVW00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1007846
- GVM variations of the species
- 2,009,487 (SNP), - (Indel)
- Submitter Organization
- International Centre for Bamboo and Rattan, icbr
- Contact
- Yinguang Hou(houyinguang@126.com)
- Sequence author(s)
- Hansheng Zhao
- Released Date
- 2026-08-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.16.1-r375
3D-DNA v170123 - Sequencing & coverage
- PacBio Sequel II 32.418
DNBSEQ-T7 136.21 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Y Hou, et al. Haplotype-based pangenomes reveal genetic variations and climate adaptations in moso bamboo populations.. Nature communications. 2024, 15(1).
Statistics of Genome Assembly
| Genome size (bp) | 1,973,349,736 |
| GC content | 44.41% |
| Genome sequence No. | 28 |
| Maximum genome sequence length (bp) | 128,155,840 |
| Minimum genome sequence length (bp) | 25,778 |
| Average genome sequence length (bp) | 70,476,776 |
| Genome sequence N50 (bp) | 83,864,109 |
| Genome sequence N90 (bp) | 58,776,733 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 69,097 | 69,097 |