Scientific Name
Jasminum sambac
Common Names
Arabian jasmine;
Bioproject
PRJCA003967
Biosample
SAMC290847
Accession No.
GWHAZHY00000000
GWH reannotation accession
-
GSA raw reads
CRR567846
GVM variations of the species
-
Submitter Organization
College of Horticulture and Plant Protection, Yangzhou University
Contact
Biao Jin, bjin@yzu.edu.cn
Sequence author(s)
Gang Chen, Salma Mostafa, Zhaogeng Lu, Jiawen Cui
Released Date
2021-12-31
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
falcon falcon v1.0
Sequencing & coverage
PacBio 116.0
Download
DNA GFF RNA Protein
Publication(s)
Gang Chen, et al. The Jasmine (Jasminum sambac) Genome Provides Insight into the Biosynthesis of Flower Fragrances and Jasmonates. Genomics, Proteomics & Bioinformatics. 2022.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHAZHY00000000 - De novo assembly_Jasmine Draft genome in scaffold level 2021-12-31 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 550,143,592
GC content 34.63%
Chromosomes sequence No. 13
Genome sequence No. 112
Maximum genome sequence length (bp) 52,967,864
Minimum genome sequence length (bp) 16,840
Average genome sequence length (bp) 4,911,996
Genome sequence N50 (bp) 40,103,637
Genome sequence N90 (bp) 34,138,291
Annotation of Whole Genome Assembly
Protein Total
Chromosome 28,451 28,451
Others 1,349 1,349
Total 29,800 29,800
Annotation Details
ChrID Protein Total
chr1 2,011 2,011
chr10 1,865 1,865
chr11 2,067 2,067
chr12 2,209 2,209
chr13 1,851 1,851
chr2 2,322 2,322
chr3 1,493 1,493
chr4 1,658 1,658
chr5 3,074 3,074
chr6 2,770 2,770
chr7 2,677 2,677
chr8 1,980 1,980
chr9 2,474 2,474
Others 1,349 1,349
Total 29,800 29,800