- Scientific Name
- Severe acute respiratory syndrome coronavirus 2
- Common Names
- -
- Bioproject
- PRJCA002533
- Biosample
- SAMC330980
- Accession No.
- GWHBABJ01000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 16,114 (SNP), 820 (Indel)
- Submitter Organization
- Institute of Infectious Diseases, Beijing Ditan Hospital, Capital Medical University
- Contact
- Hui Zeng, zenghui@ccmu.edu.cn
- Sequence author(s)
- Hui Zeng
- Released Date
- 2021-03-13
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- BCFtools v0.1.19
- Sequencing & coverage
- Nextseq 500 0.9
- Download
- DNA
- Publication(s)
- Ju Zhang, et al. Phylogenomic tracing of asymptomatic transmission in a COVID-19 outbreak. Innovation. 2021, 2(2): 100099.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBABJ01000000 | - | P14_20200310_sputum | Draft genome in scaffold level | 2021-03-13 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 29,652 |
| GC content | 37.58% |
| Scaffold sequence No. | 1 |
| Maximum scaffold sequence length (bp) | 29,652 |
| Minimum scaffold sequence length (bp) | 29,652 |
| Average scaffold sequence length (bp) | 29,652 |
| Scaffold N50 (bp) | 29,652 |
| Scaffold N90 (bp) | 29,652 |