Scientific Name
Ginkgo biloba
Common Names
ginkgo; maidenhair tree; Ginkgo biloba f. epiphylla, Ginkgo biloba var. epiphylla
Bioproject
PRJCA001755
Biosample
SAMC108288
Accession No.
GWHBAVD00000000
GWH reannotation accession
-
GSA raw reads
CRR077817, CRR076969, CRR077816, CRR077819, CRR077818,
CRR076960, CRR076962, CRR076961, CRR076964, CRR077811,
CRR076963, CRR077810, CRR076966, CRR077813, CRR076965,
CRR077812, CRR076968, CRR077815, CRR076967, CRR077814,
CRR077828, CRR077827, CRR077829, CRR076971, CRR076970,
CRR076973, CRR077820, CRR076972, CRR076975, CRR077822,
CRR076974, CRR077821, CRR076977, CRR077824, CRR076976,
CRR077823, CRR076979, CRR077826, CRR076978, CRR077825,
CRR076948, CRR076947, CRR076949, CRR076940, CRR076942,
CRR076941, CRR076944, CRR076943, CRR076946, CRR076945,
CRR076959, CRR077806, CRR076958, CRR077805, CRR077808,
CRR077807, CRR077809, CRR076951, CRR076950, CRR076953,
CRR077800, CRR076952, CRR076955, CRR077802, CRR076954,
CRR077801, CRR076957, CRR077804, CRR076956, CRR077803,
CRR076926, CRR076925, CRR076928, CRR076927, CRR076929,
CRR076920, CRR076922, CRR076921, CRR076924, CRR076923,
CRR076937, CRR076936, CRR076939, CRR076938, CRR076931,
CRR076930, CRR076933, CRR076932, CRR076935, CRR076934,
CRR076904, CRR076903, CRR076906, CRR076905, CRR076908,
CRR076907, CRR076909, CRR076900, CRR076902, CRR076901,
CRR076915, CRR076914, CRR076917, CRR076916, CRR076919,
CRR076918, CRR076911, CRR076910, CRR076913, CRR076912,
CRR077891, CRR077890, CRR077651, CRR077893, CRR077650,
CRR077892, CRR077411, CRR077653, CRR077895, CRR077410,
CRR077652, CRR077894, CRR077413, CRR077655, CRR077897,
CRR077412, CRR077654, CRR077896, CRR077415, CRR077657,
CRR077899, CRR077414, CRR077656, CRR077898, CRR077417,
CRR077659, CRR077416, CRR077658, CRR077419, CRR077418,
CRR077660, CRR077420, CRR077662, CRR077661, CRR077422,
CRR077664, CRR077421, CRR077663, CRR077424, CRR077666,
CRR077423, CRR077665, CRR077426, CRR077668, CRR077425,
CRR077667, CRR077428, CRR077427, CRR077669, CRR077429,
CRR077871, CRR077870, CRR077631, CRR077873, CRR077630,
CRR077872, CRR077633, CRR077875, CRR077632, CRR077874,
CRR076788, CRR077635, CRR077877, CRR077634, CRR077876,
CRR077637, CRR077879, CRR076789, CRR077636, CRR077878,
CRR077639, CRR077638, CRR077409, CRR076791, CRR077880,
CRR076790, CRR076793, CRR077640, CRR077882, CRR076792,
CRR077881, CRR076795, CRR077400, CRR077642, CRR077884,
CRR076794, CRR077641, CRR077883, CRR076797, CRR077402,
CRR077644, CRR077886, CRR076796, CRR077401, CRR077643,
CRR077885, CRR076799, CRR077404, CRR077646, CRR077888,
CRR076798, CRR077403, CRR077645, CRR077887, CRR077406,
CRR077648, CRR077405, CRR077647, CRR077889, CRR077408,
CRR077407, CRR077649, CRR077619, CRR077618, CRR077851,
CRR077850, CRR077611, CRR077853, CRR077610, CRR077852,
CRR077613, CRR077855, CRR077612, CRR077854, CRR077615,
CRR077857, CRR077614, CRR077856, CRR077617, CRR077859,
CRR077616, CRR077858, CRR077629, CRR077860, CRR077620,
CRR077862, CRR077861, CRR077622, CRR077864, CRR077621,
CRR077863, CRR077624, CRR077866, CRR077623, CRR077865,
CRR077626, CRR077868, CRR077625, CRR077867, CRR077628,
CRR077627, CRR077869, CRR077839, CRR077838, CRR076980,
CRR076982, CRR076981, CRR076984, CRR077831, CRR076983,
CRR077830, CRR076986, CRR077833, CRR076985, CRR077832,
CRR076988, CRR077835, CRR076987, CRR077834, CRR077837,
CRR076989, CRR077836, CRR077608, CRR077607, CRR077849,
CRR077609, CRR076991, CRR076990, CRR076993, CRR077840,
CRR076992, CRR076995, CRR077600, CRR077842, CRR076994,
CRR077841, CRR076997, CRR077602, CRR077844, CRR076996,
CRR077601, CRR077843, CRR076999, CRR077604, CRR077846,
CRR076998, CRR077603, CRR077845, CRR077606, CRR077848,
CRR077605, CRR077847, CRR077381, CRR077380, CRR077130,
CRR077372, CRR077371, CRR077132, CRR077374, CRR077131,
CRR077373, CRR077134, CRR077376, CRR077133, CRR077375,
CRR077136, CRR077378, CRR077135, CRR077377, CRR077138,
CRR077137, CRR077379, CRR077139, CRR077390, CRR077150,
CRR077392, CRR077391, CRR077141, CRR077383, CRR077140,
CRR077382, CRR077143, CRR077385, CRR077142, CRR077384,
CRR077145, CRR077387, CRR077144, CRR077386, CRR077147,
CRR077389, CRR077146, CRR077388, CRR077149, CRR077148,
CRR077350, CRR077592, CRR077591, CRR077110, CRR077352,
CRR077594, CRR077351, CRR077593, CRR077112, CRR077354,
CRR077596, CRR077111, CRR077353, CRR077595, CRR077114,
CRR077356, CRR077598, CRR077113, CRR077355, CRR077597,
CRR077116, CRR077358, CRR077115, CRR077357, CRR077599,
CRR077118, CRR077117, CRR077359, CRR077119, CRR077370,
CRR077361, CRR077360, CRR077121, CRR077363, CRR077120,
CRR077362, CRR077123, CRR077365, CRR077122, CRR077364,
CRR077125, CRR077367, CRR077124, CRR077366, CRR077127,
CRR077369, CRR077126, CRR077368, CRR077129, CRR077128,
CRR077570, CRR077330, CRR077572, CRR077571, CRR077332,
CRR077574, CRR077331, CRR077573, CRR077334, CRR077576,
CRR077333, CRR077575, CRR077336, CRR077578, CRR077335,
CRR077577, CRR077338, CRR077337, CRR077579, CRR077339,
CRR077590, CRR077581, CRR077580, CRR077341, CRR077583,
CRR077340, CRR077582, CRR077101, CRR077343, CRR077585,
CRR077100, CRR077342, CRR077584, CRR077103, CRR077345,
CRR077587, CRR077102, CRR077344, CRR077586, CRR077105,
CRR077347, CRR077589, CRR077104, CRR077346, CRR077588,
CRR077107, CRR077349, CRR077106, CRR077348, CRR077109,
CRR077108, CRR077790, CRR077550, CRR077792, CRR077791,
CRR077310, CRR077552, CRR077794, CRR077551, CRR077793,
CRR077312, CRR077554, CRR077796, CRR077311, CRR077553,
CRR077795, CRR077314, CRR077556, CRR077798, CRR077313,
CRR077555, CRR077797, CRR077316, CRR077558, CRR077315,
CRR077557, CRR077799, CRR077318, CRR077317, CRR077559,
CRR077319, CRR077561, CRR077560, CRR077321, CRR077563,
CRR077320, CRR077562, CRR077323, CRR077565, CRR077322,
CRR077564, CRR077325, CRR077567, CRR077324, CRR077566,
CRR077327, CRR077569, CRR077326, CRR077568, CRR077329,
CRR077328, CRR077196, CRR077195, CRR077198, CRR077197,
CRR077199, CRR077181, CRR077180, CRR077183, CRR077182,
CRR077174, CRR077173, CRR077176, CRR077175, CRR077178,
CRR077177, CRR077179, CRR077190, CRR077192, CRR077191,
CRR077194, CRR077193, CRR077185, CRR077184, CRR077187,
CRR077186, CRR077189, CRR077188, CRR077161, CRR077160,
CRR077152, CRR077394, CRR078000, CRR077151, CRR077393,
CRR078001, CRR077154, CRR077396, CRR077153, CRR077395,
CRR077156, CRR077398, CRR078004, CRR077155, CRR077397,
CRR078005, CRR077158, CRR078002, CRR077157, CRR077399,
CRR078003, CRR078008, CRR077159, CRR078009, CRR078006,
CRR078007, CRR077170, CRR077172, CRR077171, CRR077163,
CRR078011, CRR077162, CRR078012, CRR077165, CRR077164,
CRR078010, CRR077167, CRR077166, CRR077169, CRR077168,
CRR076849, CRR077938, CRR076848, CRR077937, CRR077939,
CRR076841, CRR077930, CRR076840, CRR076843, CRR077932,
CRR076842, CRR077931, CRR076845, CRR077934, CRR076844,
CRR077933, CRR076847, CRR077936, CRR076846, CRR077935,
CRR077707, CRR077949, CRR076859, CRR077706, CRR077948,
CRR077709, CRR077708, CRR076850, CRR076852, CRR077941,
CRR076851, CRR077940, CRR076854, CRR077701, CRR077943,
CRR076853, CRR077700, CRR077942, CRR076856, CRR077703,
CRR077945, CRR076855, CRR077702, CRR077944, CRR076858,
CRR077705, CRR077947, CRR076857, CRR077704, CRR077946,
CRR076827, CRR077916, CRR076826, CRR077915, CRR076829,
CRR077918, CRR076828, CRR077917, CRR077919, CRR076821,
CRR077910, CRR076820, CRR076823, CRR077912, CRR076822,
CRR077911, CRR076825, CRR077914, CRR076824, CRR077913,
CRR076838, CRR077927, CRR076837, CRR077926, CRR077929,
CRR076839, CRR077928, CRR076830, CRR076832, CRR077921,
CRR076831, CRR077920, CRR076834, CRR077923, CRR076833,
CRR077922, CRR076836, CRR077925, CRR076835, CRR077924,
CRR076805, CRR076804, CRR076807, CRR076806, CRR076809,
CRR076808, CRR076801, CRR076800, CRR076803, CRR076802,
CRR076816, CRR077905, CRR076815, CRR077904, CRR076818,
CRR077907, CRR076817, CRR077906, CRR077909, CRR076819,
CRR077908, CRR076810, CRR076812, CRR077901, CRR076811,
CRR077900, CRR076814, CRR077903, CRR076813, CRR077902,
CRR077770, CRR077530, CRR077772, CRR077771, CRR077532,
CRR077774, CRR077531, CRR077773, CRR077534, CRR077776,
CRR077533, CRR077775, CRR077536, CRR077778, CRR077535,
CRR077777, CRR077538, CRR077537, CRR077779, CRR077539,
CRR077781, CRR077780, CRR077541, CRR077783, CRR077540,
CRR077782, CRR077301, CRR077543, CRR077785, CRR077300,
CRR077542, CRR077784, CRR077303, CRR077545, CRR077787,
CRR077302, CRR077544, CRR077786, CRR077305, CRR077547,
CRR077789, CRR077304, CRR077546, CRR077788, CRR077307,
CRR077549, CRR077306, CRR077548, CRR077309, CRR077308,
CRR077519, CRR077990, CRR077750, CRR077992, CRR077991,
CRR077510, CRR077752, CRR077994, CRR077751, CRR077993,
CRR077512, CRR077754, CRR077996, CRR077511, CRR077753,
CRR077995, CRR077514, CRR077756, CRR077998, CRR077513,
CRR077755, CRR077997, CRR077516, CRR077758, CRR077515,
CRR077757, CRR077999, CRR077518, CRR077517, CRR077759,
CRR077761, CRR077760, CRR077521, CRR077763, CRR077520,
CRR077762, CRR077523, CRR077765, CRR077522, CRR077764,
CRR077525, CRR077767, CRR077524, CRR077766, CRR077527,
CRR077769, CRR077526, CRR077768, CRR077529, CRR077528,
CRR077739, CRR076881, CRR077970, CRR076880, CRR076883,
CRR077730, CRR077972, CRR076882, CRR077971, CRR076885,
CRR077732, CRR077974, CRR076884, CRR077731, CRR077973,
CRR076887, CRR077734, CRR077976, CRR076886, CRR077733,
CRR077975, CRR076889, CRR077736, CRR077978, CRR076888,
CRR077735, CRR077977, CRR077738, CRR077737, CRR077979,
CRR077509, CRR077508, CRR076890, CRR076892, CRR077981,
CRR076891, CRR077980, CRR076894, CRR077741, CRR077983,
CRR076893, CRR077740, CRR077982, CRR076896, CRR077501,
CRR077743, CRR077985, CRR076895, CRR077500, CRR077742,
CRR077984, CRR076898, CRR077503, CRR077745, CRR077987,
CRR076897, CRR077502, CRR077744, CRR077986, CRR077505,
CRR077747, CRR077989, CRR076899, CRR077504, CRR077746,
CRR077988, CRR077507, CRR077749, CRR077506, CRR077748,
CRR077718, CRR077717, CRR077959, CRR077719, CRR076861,
CRR077950, CRR076860, CRR076863, CRR077710, CRR077952,
CRR076862, CRR077951, CRR076865, CRR077712, CRR077954,
CRR076864, CRR077711, CRR077953, CRR076867, CRR077714,
CRR077956, CRR076866, CRR077713, CRR077955, CRR076869,
CRR077716, CRR077958, CRR076868, CRR077715, CRR077957,
CRR077729, CRR077728, CRR076870, CRR076872, CRR077961,
CRR076871, CRR077960, CRR076874, CRR077721, CRR077963,
CRR076873, CRR077720, CRR077962, CRR076876, CRR077723,
CRR077965, CRR076875, CRR077722, CRR077964, CRR076878,
CRR077725, CRR077967, CRR076877, CRR077724, CRR077966,
CRR077727, CRR077969, CRR076879, CRR077726, CRR077968,
CRR077260, CRR077251, CRR077493, CRR077250, CRR077492,
CRR077011, CRR077253, CRR077495, CRR077010, CRR077252,
CRR077494, CRR077013, CRR077255, CRR077497, CRR077012,
CRR077254, CRR077496, CRR077015, CRR077257, CRR077499,
CRR077014, CRR077256, CRR077498, CRR077017, CRR077259,
CRR077016, CRR077258, CRR077019, CRR077018, CRR077271,
CRR077270, CRR077020, CRR077262, CRR077261, CRR077022,
CRR077264, CRR077021, CRR077263, CRR077024, CRR077266,
CRR077023, CRR077265, CRR077026, CRR077268, CRR077025,
CRR077267, CRR077028, CRR077027, CRR077269, CRR077029,
CRR077480, CRR077471, CRR077470, CRR077231, CRR077473,
CRR077230, CRR077472, CRR077233, CRR077475, CRR077232,
CRR077474, CRR077235, CRR077477, CRR077234, CRR077476,
CRR077237, CRR077479, CRR077236, CRR077478, CRR077239,
CRR077238, CRR077491, CRR077490, CRR077240, CRR077482,
CRR077481, CRR077000, CRR077242, CRR077484, CRR077241,
CRR077483, CRR077002, CRR077244, CRR077486, CRR077001,
CRR077243, CRR077485, CRR077004, CRR077246, CRR077488,
CRR077003, CRR077245, CRR077487, CRR077006, CRR077248,
CRR077005, CRR077247, CRR077489, CRR077008, CRR077007,
CRR077249, CRR077009, CRR077691, CRR077690, CRR077451,
CRR077693, CRR077450, CRR077692, CRR077211, CRR077453,
CRR077695, CRR077210, CRR077452, CRR077694, CRR077213,
CRR077455, CRR077697, CRR077212, CRR077454, CRR077696,
CRR077215, CRR077457, CRR077699, CRR077214, CRR077456,
CRR077698, CRR077217, CRR077459, CRR077216, CRR077458,
CRR077219, CRR077218, CRR077460, CRR077220, CRR077462,
CRR077461, CRR077222, CRR077464, CRR077221, CRR077463,
CRR077224, CRR077466, CRR077223, CRR077465, CRR077226,
CRR077468, CRR077225, CRR077467, CRR077228, CRR077227,
CRR077469, CRR077229, CRR077671, CRR077670, CRR077431,
CRR077673, CRR077430, CRR077672, CRR077433, CRR077675,
CRR077432, CRR077674, CRR077435, CRR077677, CRR077434,
CRR077676, CRR077437, CRR077679, CRR077436, CRR077678,
CRR077439, CRR077438, CRR077680, CRR077440, CRR077682,
CRR077681, CRR077200, CRR077442, CRR077684, CRR077441,
CRR077683, CRR077202, CRR077444, CRR077686, CRR077201,
CRR077443, CRR077685, CRR077204, CRR077446, CRR077688,
CRR077203, CRR077445, CRR077687, CRR077206, CRR077448,
CRR077205, CRR077447, CRR077689, CRR077208, CRR077207,
CRR077449, CRR077209, CRR077097, CRR077096, CRR077099,
CRR077098, CRR077080, CRR077082, CRR077081, CRR077084,
CRR077083, CRR077075, CRR077074, CRR077077, CRR077076,
CRR077079, CRR077078, CRR077091, CRR077090, CRR077093,
CRR077092, CRR077095, CRR077094, CRR077086, CRR077085,
CRR077088, CRR077087, CRR077089, CRR077060, CRR077062,
CRR077061, CRR077053, CRR077295, CRR077052, CRR077294,
CRR077055, CRR077297, CRR077054, CRR077296, CRR077057,
CRR077299, CRR077056, CRR077298, CRR077059, CRR077058,
CRR077071, CRR077070, CRR077073, CRR077072, CRR077064,
CRR077063, CRR077066, CRR077065, CRR077068, CRR077067,
CRR077069, CRR077280, CRR077040, CRR077282, CRR077281,
CRR077031, CRR077273, CRR077030, CRR077272, CRR077033,
CRR077275, CRR077032, CRR077274, CRR077035, CRR077277,
CRR077034, CRR077276, CRR077037, CRR077279, CRR077036,
CRR077278, CRR077039, CRR077038, CRR077291, CRR077290,
CRR077051, CRR077293, CRR077050, CRR077292, CRR077042,
CRR077284, CRR077041, CRR077283, CRR077044, CRR077286,
CRR077043, CRR077285, CRR077046, CRR077288, CRR077045,
CRR077287, CRR077048, CRR077047, CRR077289, CRR077049,
GVM variations of the species
-
Submitter Organization
College of Forestry, Nanjing Forestry University
Contact
Hailin Liu, lhl@njfu.edu.cn
Sequence author(s)
Hailin Liu
Released Date
2021-06-04
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Wtdbg2 v1.0
Sequencing & coverage
PacBio 44.0
Download
DNA GFF RNA Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBAVD00000000 - Gbi_Chr Draft genome in chromosome level 2021-06-04 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 9,876,722,033
GC content 34.78%
Genome sequence No. 242,858
Maximum genome sequence length (bp) 1,185,857,400
Minimum genome sequence length (bp) 1,354
Average genome sequence length (bp) 40,669
Genome sequence N50 (bp) 754,572,270
Genome sequence N90 (bp) 667,571,075
Annotation of Whole Genome Assembly
Protein Pseudogene Total
Chromosome 22,021 5,457 27,478
Others 131 227 358
Total 22,152 5,684 27,836
Annotation Details
ChrID Protein Pseudogene Total
chr1 2,663 650 3,313
chr10 1,693 443 2,136
chr11 1,515 331 1,846
chr12 1,523 368 1,891
chr2 1,750 477 2,227
chr3 1,974 490 2,464
chr4 1,933 454 2,387
chr5 1,658 444 2,102
chr6 1,870 465 2,335
chr7 1,761 425 2,186
chr8 1,914 440 2,354
chr9 1,767 470 2,237
Others 131 227 358
Total 22,152 5,684 27,836