- Scientific Name
- Cymbidium ensifolium
- Common Names
- -
- Bioproject
- PRJCA005355
- Biosample
- SAMC383359
- Accession No.
- GWHBCII00000000
- GWH reannotation accession
- -
- GSA raw reads
-
CRR290468,
CRR290469,
CRR290480,
CRR290481,
CRR290464,
more
CRR290486, CRR290465, CRR290487, CRR290466, CRR290488,
CRR290467, CRR290489, CRR290460, CRR290482, CRR290461,
CRR290483, CRR290462, CRR290484, CRR290463, CRR290485,
CRR290457, CRR290479, CRR290458, CRR290459, CRR290490,
CRR290491, CRR290470, CRR290492, CRR290453, CRR290475,
CRR290454, CRR290476, CRR290455, CRR290477, CRR290456,
CRR290478, CRR290471, CRR290493, CRR290472, CRR290473,
CRR290452, CRR290474, hide - GVM variations of the species
- -
- Submitter Organization
- College of Art and Landscape Architecture, Fujian Agriculture and Forestry University
- Contact
- Ai Ye, aiyefafu@163.com
- Sequence author(s)
- Ai Ye
- Released Date
- 2021-12-23
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg 1.2.8
- Sequencing & coverage
- PacBio 98.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Ye Ai, et al. The Cymbidium genome reveals the evolution of unique morphological traits. Horticulture Research. 2021, 8(1): 255.
Statistics of Genome Assembly
| Genome size (bp) | 3,623,198,571 |
| GC content | 33.58% |
| Scaffold sequence No. | 26,303 |
| Maximum scaffold sequence length (bp) | 208,335,477 |
| Minimum scaffold sequence length (bp) | 201 |
| Average scaffold sequence length (bp) | 137,748 |
| Scaffold N50 (bp) | 92,663,771 |
| Scaffold N90 (bp) | 53,000 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 28,738 | 28,738 |