Scientific Name
Panthera tigris amoyensis
Common Names
Amoy tiger;
Bioproject
PRJCA006384
Biosample
SAMC452646
Accession No.
GWHBEIN00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
Scientific Research Department, Guangzhou Zoo & Guangzhou Wildlife Research Center
Contact
Chen Wang, wangchen_gzzoo@sina.com
Sequence author(s)
Wu Chen
Released Date
2022-08-02
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
WTDBG 1.2.8
Sequencing & coverage
Illumina HiSeq 2500 421.55
PacBio 50.96
HiC 212.98
Bionano 180.53
Download
DNA
Publication(s)
Chen Wang, et al. Population genomic analysis provides evidence of the past success and future potential of South China tiger captive conservation. BMC Biology. 2023, 21(1): 64.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBEIN00000000 - Amotig1.0 Draft genome in chromosome level 2022-08-02 DNA

Statistics of Genome Assembly

Genome size (bp) 2,438,964,960
GC content 41.67%
Genome sequence No. 762
Maximum genome sequence length (bp) 240,183,284
Minimum genome sequence length (bp) 2,988
Average genome sequence length (bp) 3,200,741
Genome sequence N50 (bp) 150,185,262
Genome sequence N90 (bp) 67,605,486