- Scientific Name
- Cinnamomum camphora
- Common Names
- camphor tree;
- Bioproject
- PRJCA005135
- Biosample
- SAMC356224
- Accession No.
- GWHBGXC00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR284421
- GVM variations of the species
- -
- Submitter Organization
- Forestry College, Fujian Agriculture and Forestry University
- Contact
- Sun Wei-Hong, W-H.S@outlook.com
- Sequence author(s)
- Zou Shuang-Quan
- Released Date
- 2021-12-31
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo 2020-4
- Sequencing & coverage
- Illumina HiSeq 2000 137.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Wei-Hong Sun, et al. The camphor tree genome enhances the understanding of magnoliids evolution. . Journal of Genetics and Genomics. 2021.
Statistics of Genome Assembly
| Genome size (bp) | 738,105,360 |
| GC content | 38.42% |
| Scaffold sequence No. | 32 |
| Maximum scaffold sequence length (bp) | 91,044,933 |
| Minimum scaffold sequence length (bp) | 2,390 |
| Average scaffold sequence length (bp) | 23,065,793 |
| Scaffold N50 (bp) | 66,259,957 |
| Scaffold N90 (bp) | 42,292,317 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 28,261 | 28,261 |