Scientific Name
Tiarella polyphylla
Common Names
-
Bioproject
PRJCA011134
Biosample
SAMC849364
Accession No.
GWHBKAH00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
School of life sciences, Henan University
Contact
Luxian Liu, liushuangcx2007@126.com
Sequence author(s)
Luxian Liu, Mengzhen Chen
Released Date
2023-06-17
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
LACHESIS 2013
Sequencing & coverage
Hi-C 99.0
Download
DNA GFF RNA Protein
Publication(s)
Bo Liu, et al. Characterization of the complete mitogenome of Tiarella polyphylla, commonly known as Asian foamflower: insights into the multi-chromosomes structure and DNA transfers. BMC genomics. 2024, 25(1): 883.
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHBKAH00000000 - hszrst Draft genome in scaffold level 2023-06-17 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 412,257,008
GC content 38.33%
Chromosomes sequence No. 7
Genome sequence No. 54
Maximum genome sequence length (bp) 79,840,142
Minimum genome sequence length (bp) 64,367
Average genome sequence length (bp) 7,634,389
Genome sequence N50 (bp) 57,234,420
Genome sequence N90 (bp) 44,079,820
Annotation of Whole Genome Assembly
Protein Total
Chromosome 24,717 24,717
Others 527 527
Total 25,244 25,244
Annotation Details
ChrID Protein Total
chr1 5,508 5,508
chr2 5,656 5,656
chr3 2,940 2,940
chr4 3,313 3,313
chr5 2,704 2,704
chr6 2,284 2,284
chr7 2,312 2,312
Others 527 527
Total 25,244 25,244