Genome Warehouse

Scientific Name: Bubalus carabanensis
Common Names: swamp type water buffalo; carabao; Bubalus arnee carabanensis, Bubalus bubalis carabanesis, Bubalus carabanensis carabanensis
Bioproject: PRJCA001297
Biosample: SAMC063215
Accession No.: GWHAAJZ00000000
GWH reannotation accession: -
GSA raw reads: CRR242180, CRR242181, CRR242179, CRR242178
GVM variations of the species: -
Submitter Organization: Laboratory of Animal Genetics and Breeding, College of Animal Science and Technology, Guangxi University
Contact: Qingyou Liu, qyliu2002@126.com
Sequence author(s): Qingyou Liu, Jue Ruan
Released Date: 2019-03-18
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: Wtdbg 1.2.8
Sequencing & coverage: PacBio 57.8
Download: DNA GFF RNA CDS Protein
Publication(s): Xier Luo, et al. Understanding divergent domestication traits from the whole-genome sequencing of swamp- and river-buffalo populations. National Science Review. 2020, 7(3): 686-701.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAAJZ00000000	-	CUSA_SWP	Draft genome in chromosome level	2019-03-18	DNA GFF RNA CDS Protein

Genome size (bp)	2,631,349,264
GC content	41.83%
Chromosomes sequence No.	24
Genome sequence No.	1,534
Maximum genome sequence length (bp)	269,091,005
Minimum genome sequence length (bp)	6,497
Average genome sequence length (bp)	1,715,352
Genome sequence N50 (bp)	117,253,548
Genome sequence N90 (bp)	61,114,690

Annotation of Whole Genome Assembly

Annotation Details