- Scientific Name
- Enterococcus raffinosus
- Common Names
- -
- Bioproject
- PRJCA011976
- Biosample
- SAMC896046
- Accession No.
- GWHBMHP00000000
- GWH reannotation accession
- GWHRA_BMHP00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Precision Health Institute, BGI Life Science Research Institute
- Contact
- Yuanqiang Zou, zouyuanqiang@genomics.cn
- Sequence author(s)
- Yuanqiang Zou
- Released Date
- 2025-02-02
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- MGI 100
- Download
- DNA Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBMHP00000000 | GWHRA_BMHP00000000.1 | AF13-1HA | Draft genome in scaffold level | 2025-02-02 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,253,683 |
| GC content | 39.36% |
| Scaffold sequence No. | 80 |
| Maximum scaffold sequence length (bp) | 462,140 |
| Minimum scaffold sequence length (bp) | 523 |
| Average scaffold sequence length (bp) | 53,171 |
| Scaffold N50 (bp) | 120,021 |
| Scaffold N90 (bp) | 40,336 |
Statistics of Genome Assembly
| Genome size (bp) | 4,253,683 |
| GC content | 39.36% |
| Scaffold sequence No. | 80 |
| Maximum scaffold sequence length (bp) | 462,140 |
| Minimum scaffold sequence length (bp) | 523 |
| Average scaffold sequence length (bp) | 53,171 |
| Scaffold N50 (bp) | 120,021 |
| Scaffold N90 (bp) | 40,336 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4,090 | 48 | 3 | 1 | 67 | 123 | 4,332 |