- Scientific Name
- Bifidobacterium longum
- Common Names
- -
- Bioproject
- PRJCA011976
- Biosample
- SAMC896058
- Accession No.
- GWHBMIB00000000
- GWH reannotation accession
- GWHRA_BMIB00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Precision Health Institute, BGI Life Science Research Institute
- Contact
- Yuanqiang Zou(zouyuanqiang@genomics.cn)
- Sequence author(s)
- Yuanqiang Zou
- Released Date
- 2025-02-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- MGI 100
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBMIB00000000 | GWHRA_BMIB00000000.1 | AF14-14LBA | Draft genome in scaffold level | 2025-02-03 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,381,812 |
| GC content | 60.29% |
| Scaffold sequence No. | 31 |
| Maximum scaffold sequence length (bp) | 479,304 |
| Minimum scaffold sequence length (bp) | 507 |
| Average scaffold sequence length (bp) | 76,833 |
| Scaffold N50 (bp) | 262,515 |
| Scaffold N90 (bp) | 103,819 |
Statistics of Genome Assembly
| Genome size (bp) | 2,381,812 |
| GC content | 60.29% |
| Scaffold sequence No. | 31 |
| Maximum scaffold sequence length (bp) | 479,304 |
| Minimum scaffold sequence length (bp) | 507 |
| Average scaffold sequence length (bp) | 76,833 |
| Scaffold N50 (bp) | 262,515 |
| Scaffold N90 (bp) | 103,819 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|
| Total | 1,891 | 51 | 6 | 53 | 42 | 2,043 |