- Scientific Name
- Limosilactobacillus fermentum
- Common Names
- Bacillus casei d, Bacillus d, Lactobacillus cellobiosus, Lactobacillus fermentum, Lactobacterium fermentum
- Bioproject
- PRJCA011976
- Biosample
- SAMC896999
- Accession No.
- GWHBNSG00000000
- GWH reannotation accession
- GWHRA_BNSG00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Precision Health Institute, BGI Life Science Research Institute
- Contact
- Yuanqiang Zou, zouyuanqiang@genomics.cn
- Sequence author(s)
- Yuanqiang Zou
- Released Date
- 2025-02-10
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- MGI 100
- Download
- DNA Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBNSG00000000 | GWHRA_BNSG00000000.1 | AM60-2pH4 | Draft genome in scaffold level | 2025-02-10 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,008,229 |
| GC content | 51.95% |
| Scaffold sequence No. | 80 |
| Maximum scaffold sequence length (bp) | 198,209 |
| Minimum scaffold sequence length (bp) | 552 |
| Average scaffold sequence length (bp) | 25,103 |
| Scaffold N50 (bp) | 49,509 |
| Scaffold N90 (bp) | 12,095 |
Statistics of Genome Assembly
| Genome size (bp) | 2,008,229 |
| GC content | 51.95% |
| Scaffold sequence No. | 80 |
| Maximum scaffold sequence length (bp) | 198,209 |
| Minimum scaffold sequence length (bp) | 552 |
| Average scaffold sequence length (bp) | 25,103 |
| Scaffold N50 (bp) | 49,509 |
| Scaffold N90 (bp) | 12,095 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|
| Total | 1,919 | 53 | 4 | 67 | 103 | 2,146 |