- Scientific Name
- Glycine max
- Common Names
- soybeans; soybean; Phaseolus max
- Bioproject
- PRJCA015288
- Biosample
- SAMC1128148
- Accession No.
- GWHCAYC00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 40,350,378 (SNP), 12,368,700 (Indel)
- Submitter Organization
- College of Agriculture, Nanjing Agricultural University
- Contact
- Long Wang, wanglongfei@njau.edu.cn
- Sequence author(s)
- Long Wang
- Released Date
- 2023-08-19
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.16.1
minimap2 v2.24
miniasm v0.3 - Sequencing & coverage
- HiFi 29.0
Nanopore Ultra-Long 124.0 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 1,011,793,938 |
| GC content | 35.02% |
| Chromosomes sequence No. | 20 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 88,847 | 88,847 |
| Total | 88,847 | 88,847 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,803 | 3,803 |
| chr10 | 4,800 | 4,800 |
| chr11 | 4,287 | 4,287 |
| chr12 | 3,805 | 3,805 |
| chr13 | 6,157 | 6,157 |
| chr14 | 3,511 | 3,511 |
| chr15 | 4,491 | 4,491 |
| chr16 | 3,591 | 3,591 |
| chr17 | 4,279 | 4,279 |
| chr18 | 4,420 | 4,420 |
| chr19 | 4,028 | 4,028 |
| chr2 | 4,993 | 4,993 |
| chr20 | 4,014 | 4,014 |
| chr3 | 4,103 | 4,103 |
| chr4 | 4,179 | 4,179 |
| chr5 | 4,145 | 4,145 |
| chr6 | 5,181 | 5,181 |
| chr7 | 4,393 | 4,393 |
| chr8 | 6,109 | 6,109 |
| chr9 | 4,558 | 4,558 |
| Total | 88,847 | 88,847 |