- Scientific Name
- Avena nuda
- Common Names
- small naked oat; Avena sativa subsp. nuda, Avena sativa var. nuda
- Bioproject
- PRJCA016282
- Biosample
- SAMC1194342
- Accession No.
- GWHCBGG00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Life Sciences, Hebei University
- Contact
- Wei Li, liweisdau@126.com
- Sequence author(s)
- Wei Li
- Released Date
- 2025-06-16
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Celera Assembler v1.9
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 10,830,857,427 |
| GC content | 43.81% |
| Chromosomes sequence No. | 21 |
| Genome sequence No. | 87 |
| Maximum genome sequence length (bp) | 700,955,894 |
| Minimum genome sequence length (bp) | 10,469 |
| Average genome sequence length (bp) | 124,492,614 |
| Genome sequence N50 (bp) | 504,619,665 |
| Genome sequence N90 (bp) | 456,028,319 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 114,709 | 114,709 |
| Others | 352 | 352 |
| Total | 115,061 | 115,061 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 6,625 | 6,625 |
| chr10 | 4,797 | 4,797 |
| chr11 | 6,192 | 6,192 |
| chr12 | 5,726 | 5,726 |
| chr13 | 5,943 | 5,943 |
| chr14 | 4,913 | 4,913 |
| chr15 | 6,496 | 6,496 |
| chr16 | 6,824 | 6,824 |
| chr17 | 4,478 | 4,478 |
| chr18 | 7,095 | 7,095 |
| chr19 | 6,121 | 6,121 |
| chr2 | 5,453 | 5,453 |
| chr20 | 3,044 | 3,044 |
| chr21 | 5,707 | 5,707 |
| chr3 | 3,773 | 3,773 |
| chr4 | 7,539 | 7,539 |
| chr5 | 5,674 | 5,674 |
| chr6 | 5,829 | 5,829 |
| chr7 | 5,098 | 5,098 |
| chr8 | 3,065 | 3,065 |
| chr9 | 4,317 | 4,317 |
| Others | 352 | 352 |
| Total | 115,061 | 115,061 |